Gene Bcav_3877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3877 
Symbol 
ID7858690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4294574 
End bp4295374 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content76% 
IMG OID643867981 
ProductABC transporter related 
Protein accessionYP_002883881 
Protein GI229822355 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4559] ABC-type hemin transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0419238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA TCCTGTCGGC GCGAGGCGTG ACCCTCACGC TCGGGGGCGC GCTGATCCTC 
GACGGCGTGG ACCTCGACGT CGCTCCCGGC GAGGTCGTCG CGCTCGTGGG TCCCAACGGG
GCCGGGAAGT CGACCCTGCT CGCCGCGCTC GCCGGCGACC TCGCCCCGGA CTCCGGCGTC
GTGCGGCTCG CCGACGCCGA CCTCCGTGCG GAGCGGGCGG CGGACCTCGC GCGCGTGCGG
GCCGTGCAGC TCCAGGAGAC GCGCATCTCG TTCGCGTTCA CGGTGCTCGA GGTCGTGCGG
ATGGGTCGCG CGCCCTGGCA CGGGACGGCG CACGCGGATG CGGACGGCGA CGTCGTCGCG
CAGTCCCTCC GGATCGCGGA GCTCGAGGAC CTCGCGCCCC GCCGCTACCC GACGCTGTCC
GGCGGGGAGA AGGCGCGGAC GTCGTTCGCG CGCGTGCTGG CCCAGCACAC CGCCGTCCTG
TTCCTCGACG AGCCGACCGC CGCCCTCGAC ATCCGCCACC AGGAGGCGGT GCTGCGCGAG
GTGCGCCGCC GTGCGGACGG CGGCGTCGCC GTCGTCGTCG TGCTCCACGA CCTCACGCTC
GCCGCCGCGC ACGCCGACCG CGTCGTCCTG CTCGACGGCG GCCGGGTCCG CGCTGACGGT
CCGCCGCGGG CCGTGCTCAC GCCCGAGCTG CTCACGCTCG TCTACCGCCA CCCCGTCGCC
GTCATCGACC ACCCCGCCTC GCCCGGGCCC GTCGTCCTTC CGGTGCGACA CCCCGCCCTC
GTTCCCTCGG AGGTCTCATG A
 
Protein sequence
MSAILSARGV TLTLGGALIL DGVDLDVAPG EVVALVGPNG AGKSTLLAAL AGDLAPDSGV 
VRLADADLRA ERAADLARVR AVQLQETRIS FAFTVLEVVR MGRAPWHGTA HADADGDVVA
QSLRIAELED LAPRRYPTLS GGEKARTSFA RVLAQHTAVL FLDEPTAALD IRHQEAVLRE
VRRRADGGVA VVVVLHDLTL AAAHADRVVL LDGGRVRADG PPRAVLTPEL LTLVYRHPVA
VIDHPASPGP VVLPVRHPAL VPSEVS