| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3874 |
|---|
| Symbol | |
|---|
| ID | 7858687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4290459 |
|---|
| End bp | 4291874 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643867978 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002883878 |
|---|
| Protein GI | 229822352 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.172055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0781303 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGCA CACGCGCGAC GAGCCGCACC GGCCGTCGCA CGATCGCGGG ACTGGCCGGC
CTCGCCGTCT CGCTCGCCGC CGGAGTGGCC CTGGCCACGT CGGCGCAGGC CGCGCCGAAC
GAGATCGACG ACGCCACCCT GCGGTGGTCG ATGAGCGTGG AGGCGGGTGG AGGCGCGTTC
TTCGGCGGGT GCAACTTCCT GTCCGCGGGC GCCGCGGGAA ACGCCGGCAG CAGCCGGCTG
TGGACCGAGG CGGACGGGTT CTACCAGACG GAGGTCGGGA ACGTCCGCGT CGAGAAGCCG
ACGGCCGACG GCGGCTGGGC GACGCCGTCG TGGGCCACGA AGTGCCAGGA CGCGAACGGT
GCCGCCGTCA GCACGGCGCC CGCCAGCACG ACGGGCGCGC AGGTCGTCCT GTCGAACGGC
GTCGGCACGG TCGACGCGGA GGCCGGCACG GCACAGGTGT CCTGGGACGG TGACGTCACC
GTCGTGTTCT ACGGCGGCAT GACGTACTGG ACGGCGAGCG ACCCCGTGCT GTCCGTCGCG
GCCGACGGCA CGGGCACGCT GACGGCGAGC GCGGGCGGGT TCGCAGCGTC GATGGAGGAC
CCGAGCCAGT GGGTGCCGAT CGAGCCGGTC CAGGTCGGGC TCGCGACGTT CAGCGGCGTG
ACGGTCACGG CCGACGGCGT CGAGGTCCAG CCCGACTACC TCGGCGTCGA GGTCACGACG
CCGGAGGGTG CCAGCCCGCA GGTGCGGACG GGCGGCTCCT GGGGTGCCTT CCCGCAGTCC
TACGTCGACT TCCACCAGGT GACGGGGCAG TCCTCGTATT GGTACTCCTC GGGCGGCAGC
GCCGACCCGA AGAAGCCGGC GACGCCGTTC ACCGTCGCGT GGACGGCCGT GCCGGGCACC
GACCCCGGGC CCGAGCCCGG CGACGGTGAG GTGCCCGTCG AGGTGATCGT GCCGGAGGAC
GGCGGACCCG GGCCCGAGCC CGGCGAGTTC AGCTGGACGA TCTCCGGCGC GGGCGCCGTC
AGCCTCGGCA CGGCCGAGGC CACGCAGTCC GGCTTCGTCG CGAACGGCGC GCTGCACGCC
ATCACGGTGA CCGACACCCG CGAGGACGCC CCGGCGTGGT CGCTGAGCGG TCAGGTCGGC
GCGTTCGCCG CGAGCGGCGG TGCGTCCTTC GGCGGGCAGG CGCTCGGCTG GGAGCCCGCG
CTCAGCGCGA ACGCCCTGGG CGCCGTCGCC GGTCCGGCCG TCGCACCCGG CGCCGGCTCG
GATGCGGGGC TCGCGGTCTC GCGGACGCTC GTCTCCGCAC CGGCCGGGCA CGCGCTCGGC
TCCGTGCAGG TCGACACCTC GCTGCAGCTC AACGCGCCCG CGGGCACCGC TCCCGGTGCC
TACACCTCCA CGCTCACGCT GACCGCGCTG AGCTGA
|
|---|
| Protein sequence | MHSTRATSRT GRRTIAGLAG LAVSLAAGVA LATSAQAAPN EIDDATLRWS MSVEAGGGAF
FGGCNFLSAG AAGNAGSSRL WTEADGFYQT EVGNVRVEKP TADGGWATPS WATKCQDANG
AAVSTAPAST TGAQVVLSNG VGTVDAEAGT AQVSWDGDVT VVFYGGMTYW TASDPVLSVA
ADGTGTLTAS AGGFAASMED PSQWVPIEPV QVGLATFSGV TVTADGVEVQ PDYLGVEVTT
PEGASPQVRT GGSWGAFPQS YVDFHQVTGQ SSYWYSSGGS ADPKKPATPF TVAWTAVPGT
DPGPEPGDGE VPVEVIVPED GGPGPEPGEF SWTISGAGAV SLGTAEATQS GFVANGALHA
ITVTDTREDA PAWSLSGQVG AFAASGGASF GGQALGWEPA LSANALGAVA GPAVAPGAGS
DAGLAVSRTL VSAPAGHALG SVQVDTSLQL NAPAGTAPGA YTSTLTLTAL S
|
|---|
| |