| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3873 |
|---|
| Symbol | |
|---|
| ID | 7858686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4289311 |
|---|
| End bp | 4290279 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643867977 |
|---|
| Product | protein of unknown function DUF916 cell surface putative |
|---|
| Protein accession | YP_002883877 |
|---|
| Protein GI | 229822351 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.1742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.257699 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCTCC TGGCGGCGCT GGTGGGCCTG CTCTCGTCGT CGCCCGCCGC CGCCGACGAC
GGCGACCTCG CCTGGAGCGT CCGACCCGCC GACAACGAGC ACGGGACGTC CCGTGCGAAC
TTCGCCTACG CCGTCGAGCC GGGTGACGTC GTCGAGGACG CGATCGTCGT GACGAACCTC
GGCCAGGCGC CGCTCGACCT GGCGGTGTAC GCGGCCGACG GGTTCTCGAC GTCCGCCGGC
CACCTCGACC TGCTGCCCGC GGACCAGCCC TCCGTGGACC TCGGCACGTG GGTGTCGCCG
TCGTCGCCCG CGATCGCGCT CGACCCGGGG GAGAGCGCCG AGGTGCCGTT CACGATCGCC
GTGCCGGCCG ACGCCGCGCC CGGCGACCAC CCGGGCGGGA TCGTGACGTC GTACGCCCAC
GGCGACGGCA CGGTGCGCCG CGACAACCGC CTGGGCTCGC GCATCCACGT CCGCGTGGCG
GGCGAGCAGG TGGTGGGCCT CGCCGTCTCC GACGTCCGTG CGGAGCACGC CACGACGCTC
GACCCGACGC GTCCCGTCGC CATGACGCTC ACGTACACGC TGACGAACAC CGGGAACGTG
CGCACGCTCG CGCACGAGGA CGTGACGGTC GCCGGGCCGG GCGGCGTCGC GGCGGTGACC
CGGTCCGCGC TCGTCGAGGA GCTGCTGCCC GGGGCGTCGG TGGAGCGCCA GGTCGTCGTC
GACGGCGTGT GGCCGCTCGT GCGGCTGGGC GCGGATCTCG CCGTCGTCCC CGAGGCGGTC
GACGGTGCGC TGGGCGAGCC GGTCGACGTC AGCACGTCCG CGTGGGCGGT GCCGTGGGGT
GCGCTCGTCG TGCTCGTCCT CGTGGTCGGC GGCGCGGTGC TGATCGGCGT GCGGCGCGGA
CGCCGAACGT CGCGTGTGAT CCCGACCACG AGTGGTTCCG GCTCCCCCGC CGGCGCACTA
CGTTCCTGA
|
|---|
| Protein sequence | MLLLAALVGL LSSSPAAADD GDLAWSVRPA DNEHGTSRAN FAYAVEPGDV VEDAIVVTNL
GQAPLDLAVY AADGFSTSAG HLDLLPADQP SVDLGTWVSP SSPAIALDPG ESAEVPFTIA
VPADAAPGDH PGGIVTSYAH GDGTVRRDNR LGSRIHVRVA GEQVVGLAVS DVRAEHATTL
DPTRPVAMTL TYTLTNTGNV RTLAHEDVTV AGPGGVAAVT RSALVEELLP GASVERQVVV
DGVWPLVRLG ADLAVVPEAV DGALGEPVDV STSAWAVPWG ALVVLVLVVG GAVLIGVRRG
RRTSRVIPTT SGSGSPAGAL RS
|
|---|
| |