Gene Bcav_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3872 
Symbol 
ID7858685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4288579 
End bp4289256 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content73% 
IMG OID643867976 
ProductHeme oxygenase 
Protein accessionYP_002883876 
Protein GI229822350 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5398] Heme oxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.121605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.243926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC TCACGCCGGC GACCGACCTC GACTCGCTCT CGACACGGCT GCGCGAGGCG 
ACCCGTCCCG AGCACGAGCA CGCGGAGACC CGGGGGTTCG TCACGGACCT GATGTCGGGC
GCTCTCGGCC GGGACGCGTA CGTCGACCTC GCCACGCAGC ACCACGCGAT CTACAGCGCC
CTGGAGGACG TGGAGTCCGC GATGGCGGGC GACGCCGTCG GCGCCACGTT CGTCTTCGGT
GAGCTCGCGC GCGTCGCCTC GCTGGAGGCG GACCTCGCGG TGCTCCGCGG CCCCGACTGG
CGCACGGACG TCCGGCTGCT CCCCTCCACG CAGGAGTACG GGGCGCGGAT CCGGTCCGCC
GGCAGCGCCT GGTCCGGTCA CTACCTGGCG CACGCGTACA CCCGCTACCT CGGGGACCTC
TCCGGCGGTC AGATCGTCCG GCGGATGCTC GAGCGCCACT ACGGCCTGGC CGACGACGAG
CTGACGTTCT ACGCGTTCCC CTCGATCGCG AAGCCGAAGG TGTTCAAGGA CGGGTACCGG
GCCAGGATCG ACGCCGCGCC GTACTCGCCC GCCGAGGGTG CCGAGATCGT GGCCGAGGTG
CGGCGCGCCT TCGCGTTCAA CTCCGCGCTG TTCACCCAGC TCGGCGAGGT GCACCACGCC
GCCGCCCGCC CCGCCTGA
 
Protein sequence
MTTLTPATDL DSLSTRLREA TRPEHEHAET RGFVTDLMSG ALGRDAYVDL ATQHHAIYSA 
LEDVESAMAG DAVGATFVFG ELARVASLEA DLAVLRGPDW RTDVRLLPST QEYGARIRSA
GSAWSGHYLA HAYTRYLGDL SGGQIVRRML ERHYGLADDE LTFYAFPSIA KPKVFKDGYR
ARIDAAPYSP AEGAEIVAEV RRAFAFNSAL FTQLGEVHHA AARPA