Gene Bcav_3850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3850 
Symbol 
ID7860590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4266194 
End bp4267360 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content72% 
IMG OID643867954 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002883854 
Protein GI229822328 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.428744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCC AGCTCACCGA CGAGCAGGCC AAGCTCAGCC AGGTCGTGCG CGAGTTCGCC 
GACGACGTCG TCGCACCGGC CGCGTACGAG TACGACACCC AGCGCCGCCT GCCGGTCGAG
ATCATCGCCC AGATGGGCGA CCTGGGGCTC TTCGGGCTGC CGTTCCCGAC CGAGGTCGGC
GGCCAGGGCA AGGACTACCT GTCGCTGTGC CTCGCGGTCG AGGCCCTGGC CCGGGCCGAC
CAGAGCATCG CCGTCACCCT CGAGGCCGGC GTCGGGCTCG GGATCATGCC GATCTACCGG
CACGGCACGC CCGAGCAGCA GCAGCGCTGG CTGCCCGACC TCCTCACCGG GCGCGCGCTC
GCGGCGTTCG GGCTCACCGA GGCCGAGGCC GGCTCGGACG CCGGCGCCAC CCGCACCACC
GCCGTCCAGG ACGGCGACGC GTGGGTCATC GACGGCAGCA AGCAGTTCAT CACCAACTCC
GGCACGCCGA TCACGTCGGT CATCACGATC ACCGCGGTGA CGGGCGAGGT GGTGCGCGAC
GACGGTGCGA CGGTCAAGGA GCTGTCGAGC TTCCTCGTGC CGTCGGGGAC CCCCGGCCTG
GAGGTCGGGC CGAGCTACGA CAAGGTCGGC TGGCACACCT CGGACACGCA TCCGCTCACC
CTCTCCGGGG TGCGCGTGCC GGCGTCGGAC ATGCTCGGCG ACCGCGGTCG GGGCTACGCG
AACTTCCTGC GCGCCCTCGA CGAGGGGCGG GTCGCGTTCG CCGCGCTCGC CACCGGAGCC
GCGCAGGGCT GCCTCGAGGA GGCGCTCCGG TACGCCAAGG AACGGCACGT GTTCGGCCGC
GAGATCGGCG CGAACCAGCA CATCGCCTTC ACCCTCGCCC GGATGCAGTC CCGCGCGCAC
ACCGCGCGCC TGGCCTACTA CGACGCCGCG CAGCGCATCG ACGCCCGGCT GCCGTTCAAG
GCCGAGGCGT CGATGGCGAA GCTTGTCGCG GGGGAGGCGG CCATGGCGAA CGCCCGGGAC
GCCTCCCAGA TCTTCGGGGG CTACGGTTTC CTCAACTCGT CGCCCGTGGG CCGGCACTAC
CGCGACGCGA AGGTGCTGGA GGTCGGCGAG GGCACGACCG AGGTGCAGCT CATGGTCATC
GCCCGCAGCC TCGGGCTCTC CGCCTAG
 
Protein sequence
MTLQLTDEQA KLSQVVREFA DDVVAPAAYE YDTQRRLPVE IIAQMGDLGL FGLPFPTEVG 
GQGKDYLSLC LAVEALARAD QSIAVTLEAG VGLGIMPIYR HGTPEQQQRW LPDLLTGRAL
AAFGLTEAEA GSDAGATRTT AVQDGDAWVI DGSKQFITNS GTPITSVITI TAVTGEVVRD
DGATVKELSS FLVPSGTPGL EVGPSYDKVG WHTSDTHPLT LSGVRVPASD MLGDRGRGYA
NFLRALDEGR VAFAALATGA AQGCLEEALR YAKERHVFGR EIGANQHIAF TLARMQSRAH
TARLAYYDAA QRIDARLPFK AEASMAKLVA GEAAMANARD ASQIFGGYGF LNSSPVGRHY
RDAKVLEVGE GTTEVQLMVI ARSLGLSA