Gene Bcav_3846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3846 
Symbol 
ID7860586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4263329 
End bp4264000 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content72% 
IMG OID643867950 
Product3-oxoacid CoA-transferase, B subunit 
Protein accessionYP_002883850 
Protein GI229822324 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTGGA CGCGGGACGA GATGGCGGCG GTCGCCGCCG CGGAGCTGCA CGACGGCGAC 
GACGTGAACC TCGGCATCGG CATCCCGACG CTCGTCGCGA ACCACCTGCC GCCGGGCGTG
CGCATCACGC TGCAGAGCGA GAACGGGATC CTCGGCCTCG GGCCGTTCCC GTTCGACGGC
GAGGAGGACG CCGACCTCAT CAACGCCGGC AAGCAGACGG TCACCGTGCT GCCGGGCGCG
AGCTTCTTCG ACTCGGCGGC GTCGTTCGGG ATGATCCGCG GCGGGCACAT CGACATCGCG
ATCCTCGGCG CGCTCGAGGT GTCGCAGACC GGGGACCTCG CGAACTGGAC GGTGCCCGGG
AAGCTCGTCA AGGGCATGGG CGGCGCCATG GACCTCGTCG CGGGCACGCC GCGCATCGTC
GTGCTCATGG ACCACGTCGC GCGCGACGGC TCACCCAAAC TGAAGCGCGA GTGCACGCTC
CCGCTGACGG GGCGCGGCGT CGTCGACCGC GTCGTCACCG ACCATGCGGT GCTCGACGTC
GACCCCGCCC GGGGGAGCCT GGTGCTGCGT CGCCTCGCGC CCGACGTGAG CGCCGACGAC
GTGCTGGCCG CGACGGAGGC CGACGTCGTC GTCGCCCTCG ATCCCGTCTC GGAGGAGGAG
GCTCGGTCAT GA
 
Protein sequence
MVWTRDEMAA VAAAELHDGD DVNLGIGIPT LVANHLPPGV RITLQSENGI LGLGPFPFDG 
EEDADLINAG KQTVTVLPGA SFFDSAASFG MIRGGHIDIA ILGALEVSQT GDLANWTVPG
KLVKGMGGAM DLVAGTPRIV VLMDHVARDG SPKLKRECTL PLTGRGVVDR VVTDHAVLDV
DPARGSLVLR RLAPDVSADD VLAATEADVV VALDPVSEEE ARS