Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3846 |
Symbol | |
ID | 7860586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 4263329 |
End bp | 4264000 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643867950 |
Product | 3-oxoacid CoA-transferase, B subunit |
Protein accession | YP_002883850 |
Protein GI | 229822324 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTGGA CGCGGGACGA GATGGCGGCG GTCGCCGCCG CGGAGCTGCA CGACGGCGAC GACGTGAACC TCGGCATCGG CATCCCGACG CTCGTCGCGA ACCACCTGCC GCCGGGCGTG CGCATCACGC TGCAGAGCGA GAACGGGATC CTCGGCCTCG GGCCGTTCCC GTTCGACGGC GAGGAGGACG CCGACCTCAT CAACGCCGGC AAGCAGACGG TCACCGTGCT GCCGGGCGCG AGCTTCTTCG ACTCGGCGGC GTCGTTCGGG ATGATCCGCG GCGGGCACAT CGACATCGCG ATCCTCGGCG CGCTCGAGGT GTCGCAGACC GGGGACCTCG CGAACTGGAC GGTGCCCGGG AAGCTCGTCA AGGGCATGGG CGGCGCCATG GACCTCGTCG CGGGCACGCC GCGCATCGTC GTGCTCATGG ACCACGTCGC GCGCGACGGC TCACCCAAAC TGAAGCGCGA GTGCACGCTC CCGCTGACGG GGCGCGGCGT CGTCGACCGC GTCGTCACCG ACCATGCGGT GCTCGACGTC GACCCCGCCC GGGGGAGCCT GGTGCTGCGT CGCCTCGCGC CCGACGTGAG CGCCGACGAC GTGCTGGCCG CGACGGAGGC CGACGTCGTC GTCGCCCTCG ATCCCGTCTC GGAGGAGGAG GCTCGGTCAT GA
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Protein sequence | MVWTRDEMAA VAAAELHDGD DVNLGIGIPT LVANHLPPGV RITLQSENGI LGLGPFPFDG EEDADLINAG KQTVTVLPGA SFFDSAASFG MIRGGHIDIA ILGALEVSQT GDLANWTVPG KLVKGMGGAM DLVAGTPRIV VLMDHVARDG SPKLKRECTL PLTGRGVVDR VVTDHAVLDV DPARGSLVLR RLAPDVSADD VLAATEADVV VALDPVSEEE ARS
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