Gene Bcav_3825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3825 
Symbol 
ID7860564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4246761 
End bp4247537 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content73% 
IMG OID643867928 
Productprotein of unknown function DUF161 
Protein accessionYP_002883829 
Protein GI229822303 
COG category[S] Function unknown 
COG ID[COG2364] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCATCC TGACCCTGAG TCTCCCGAGC GACCGCCGCG CCGAGCGTCT CGTGCGCCTT 
CACCTCGGGC TGCTGCTGTA CGGGCTCAGC CTGGCGATGC TCGTCGAGTC GGGAATCGGG
CTGCGGCCGT GGGACGTGTT CCACGACGGC GTCGCGCGCC TCACAGGCAC CAGCATCGGT
CTCGTGACGG GTGTGGTCGG CGTCGCCGTC CTGCTCCTGT GGTGGCCGCT TCGCGAGCGG
CCGGGCATCG GCACGGTGAG CAACGCCGTC GTCAGCGGGT TCGTGCTCGA CGGCGCGATC
GCCGTCCTCC CGACGGCGCA CGGCTACCCG GGGCGGCTCG CGTACCTCGT CGCGGGCATC
CTGCTCAACG GCGTCGCGAC GGCGCTCTAC ATCGGAGCCG GGCTGGGCGC CGGTTCCCGC
GACGGCCTCA TGACCGGGCT CGCGGCCCGC ACGGGCTGGC CGCTCCGCGC GGTGCGCACG
GGCATCGAGG TCGGCGTGCT CGCGATCGGC TGGGCGCTCG GGGGCACCGT GGGGATCGGC
ACCGTTCTCT ATGCGCTCGC CGTCGGCCCG ATCGTGCACG CGGTGCTGCC GCTCGTCACG
CCGGCCGCGC GCTCCGTCCC CCTCCGCCCG CGAGGCGACG TCGACGTCCA TGACATGAGG
TCCCGTCACG CCGCCGGGAG AGCCGCGATA CCAGGTGCGG GCGAAGGCGG GCAGGTGGAG
CGCGACGACA AACCCGGATG TCGATCGTCC GCGATAGGGC CTACCGTGAG CGCATGA
 
Protein sequence
MSILTLSLPS DRRAERLVRL HLGLLLYGLS LAMLVESGIG LRPWDVFHDG VARLTGTSIG 
LVTGVVGVAV LLLWWPLRER PGIGTVSNAV VSGFVLDGAI AVLPTAHGYP GRLAYLVAGI
LLNGVATALY IGAGLGAGSR DGLMTGLAAR TGWPLRAVRT GIEVGVLAIG WALGGTVGIG
TVLYALAVGP IVHAVLPLVT PAARSVPLRP RGDVDVHDMR SRHAAGRAAI PGAGEGGQVE
RDDKPGCRSS AIGPTVSA