| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3821 |
|---|
| Symbol | |
|---|
| ID | 7860560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 4242663 |
|---|
| End bp | 4243886 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643867924 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_002883825 |
|---|
| Protein GI | 229822299 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGACG TCAGCGGGAT CGCGCTCATC GTGGCGCTCG GCGTGGCTGG TCAGGTCGGC
GCGAAGGCCC TCCGCGTGCC GTCGATCCTC CTGCTGCTCA CGCTCGGCCT GCTCGCCGGT
CCGGTGCTGG GCTGGCTGGA CCCGGACGCG ATCTTCGGCG AGGCCCTGTT TCCGCTCGTC
TCGATGGCCG TCGGGCTCCT GCTCTTCGAG GAGTCGCTCA AGCTCGACTT CGCCCGGCTC
CGCGGTGGCG CCCGCCGCCC GGTGATCGGC CTGGTGACGG CAGGAGCGCT GCTCACCGGC
ATCGGCGCGA CGGTCGTCGC GCACCTCGTT CTCGGCCTCG CGTGGTCGCA GGCGGCGGTG
ATCGGCGCCA TCCTCATCGT GTCGGGACCC ACCGTCGTCG GGCCGCTGCT GAAGATCATC
CGCCCCAAGC AGCCGCTGGA GTCCGTGCTC GCGTTCGAGG GCATCTTCAT CGACCCGATC
GGTGCCGTCC TCGCCCTCGC CGTCGCGAAC GTCGCGCTGC ACGCCGAGGC GACGCACCTC
GGGCTGACCG CCCTGTCCGG CCTGGGGATC GGTGCGGCGG CGGCCCTGGT GCTCGTCCTG
CTCATCCGGA CCGGTCTCGT GCCGAAGGAG ACCGAGGTGA TCCTCGCGCT GGCGTTCGCG
CTCGGCGCCT ACACGGTCGC CGAAGGGCTG CACGACGAGG CCGGCCTGTT CGCGACGACG
GCGCTCGGCG CGGCGCTCGC GAATCAGCGG ATCGCGCGCA CCGAGCCGCT CCACGAGTTC
GGTTCCCACC TCGGCCTGCT GCTCGTCGGA GCCCTGTTCA TCATCCTTGC TGCGCGCGTC
GACCTCGACG CACTCGTGCG CTACCTCCCC GCGACGCTCG GTGTCGTCGC GGTCCTCGTC
CTCGTGCTGC GCCCGCTCGT CGCCGCTGTG TCGACGCTCC GGAGCACGCT CACGCCACGC
GAACGGATGA TGGTGGGCTG GATGGCGCCG CGGGGCATCG TCGCGGCGTC CACCGCATCG
GTGTTCGCGC TGCGGTTCGA CGACGCCGGG CAACCGTTCC CGCAGCTCGT GCCGGTCGTG
TTCGGCGTCG TGCTGCTGAC GGCGATCGTG TACGGGCTCA CGGGCGCGCC GGTGGCACAG
GCGCTCGGCG TGCGCTCCAG CGGCGCCGAG GATCTCGACG ACGACGGCGT CGCCGTCGTC
CCGGCTCCCG CCGGTCGTGT GTGA
|
|---|
| Protein sequence | MGDVSGIALI VALGVAGQVG AKALRVPSIL LLLTLGLLAG PVLGWLDPDA IFGEALFPLV
SMAVGLLLFE ESLKLDFARL RGGARRPVIG LVTAGALLTG IGATVVAHLV LGLAWSQAAV
IGAILIVSGP TVVGPLLKII RPKQPLESVL AFEGIFIDPI GAVLALAVAN VALHAEATHL
GLTALSGLGI GAAAALVLVL LIRTGLVPKE TEVILALAFA LGAYTVAEGL HDEAGLFATT
ALGAALANQR IARTEPLHEF GSHLGLLLVG ALFIILAARV DLDALVRYLP ATLGVVAVLV
LVLRPLVAAV STLRSTLTPR ERMMVGWMAP RGIVAASTAS VFALRFDDAG QPFPQLVPVV
FGVVLLTAIV YGLTGAPVAQ ALGVRSSGAE DLDDDGVAVV PAPAGRV
|
|---|
| |