Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3807 |
Symbol | |
ID | 7860546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 4226763 |
End bp | 4227827 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 643867910 |
Product | ABC transporter related |
Protein accession | YP_002883811 |
Protein GI | 229822285 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCCG GGCTGAGGGT GACGGACGCC GTCGTCACCT ACGGAGCCGG CGAGCGGCGG ACGACGGCGG TCGCCGGGGT GTCGCTCGCT GTGTCGCCGG GCGAGGTGGT CGCGCTGCTC GGGCCGAGCG GGTGCGGCAA GTCCAGCCTC CTGCGTGCCG TGGCCGGTCT CGAGCCGCTC GCAGCCGGCG CCGTGGCGTG GGACGACGCC GACCTGGCCG GCGTCCCCGT GCACCGCCGC TCGTTCGGGC TCATGTTCCA GGACGGCCAG CTGTTCCCGC ACCGCGACGT CGCCGGGAAC GTGGCCTACG GGCTGCCGGG CGTGCGCCGG CTGCCTGCGG CGGCGCGCGC GGCGCGGGTC GACGAGCTCC TGGACCTGGT GGGGCTCACC GGGTTCGGGC GCCGTGCCGT CTCCACGCTC TCGGGCGGGG AGGCGCAACG GGTCGCGCTC GCGCGGTCCC TCGCGCCGTC GCCGCGGCTG CTCCTGCTCG ACGAGCCGCT GTCCGCGCTC GACCGTGCGC TGCGCGAGTC GCTCGCGCCC CTGCTGCGCC GCGTGCTGCT CGCCGCGGGC ACGACCGCCC TGTACGTGAC GCACGACCAC GACGAGGCGT TCACCGTCGC CGACCGCGTG GCCGTCATGC ACCGCGGCCG GCTGCTCCAG GTCGACACGC CCGCCGCGCT CTGGGCTCGG CCGCGCGACG CCGACGTCGC GGCGTTCCTC GGGTACGGCG TCGTGCCAGG GGGAGCTGGC CGCACGGGCG ACGGTCCCTC GGCCGCGGAT GCCGGCGTCG TCGACGCTTC CGACGCCTCC GACGCCGGCG ACGACGGCGT CGCGCTCGCC CTCCGGCCCG GCGCGCTGCG GGTCGTGCCT GGGGACGCCT CGGCGCGGCG CACCGGAGTC GTGCGGGCCG TGCGCTTCCG GCGCGGGGCG GTCGAGGCGG TCCTCGACGT CGACGGCTGG GGCGAGCAGG TCGCCGTCGT GCCGGCCGAG ATCGCCGTGC ACCCCGGCGA CGTCGTCACG CTCGCCGTCG ACCCCGGCGG CGTGCTCCGG CTCCCGCGCC CCTGA
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Protein sequence | MSAGLRVTDA VVTYGAGERR TTAVAGVSLA VSPGEVVALL GPSGCGKSSL LRAVAGLEPL AAGAVAWDDA DLAGVPVHRR SFGLMFQDGQ LFPHRDVAGN VAYGLPGVRR LPAAARAARV DELLDLVGLT GFGRRAVSTL SGGEAQRVAL ARSLAPSPRL LLLDEPLSAL DRALRESLAP LLRRVLLAAG TTALYVTHDH DEAFTVADRV AVMHRGRLLQ VDTPAALWAR PRDADVAAFL GYGVVPGGAG RTGDGPSAAD AGVVDASDAS DAGDDGVALA LRPGALRVVP GDASARRTGV VRAVRFRRGA VEAVLDVDGW GEQVAVVPAE IAVHPGDVVT LAVDPGGVLR LPRP
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