Gene Bcav_3807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3807 
Symbol 
ID7860546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4226763 
End bp4227827 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content78% 
IMG OID643867910 
ProductABC transporter related 
Protein accessionYP_002883811 
Protein GI229822285 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG GGCTGAGGGT GACGGACGCC GTCGTCACCT ACGGAGCCGG CGAGCGGCGG 
ACGACGGCGG TCGCCGGGGT GTCGCTCGCT GTGTCGCCGG GCGAGGTGGT CGCGCTGCTC
GGGCCGAGCG GGTGCGGCAA GTCCAGCCTC CTGCGTGCCG TGGCCGGTCT CGAGCCGCTC
GCAGCCGGCG CCGTGGCGTG GGACGACGCC GACCTGGCCG GCGTCCCCGT GCACCGCCGC
TCGTTCGGGC TCATGTTCCA GGACGGCCAG CTGTTCCCGC ACCGCGACGT CGCCGGGAAC
GTGGCCTACG GGCTGCCGGG CGTGCGCCGG CTGCCTGCGG CGGCGCGCGC GGCGCGGGTC
GACGAGCTCC TGGACCTGGT GGGGCTCACC GGGTTCGGGC GCCGTGCCGT CTCCACGCTC
TCGGGCGGGG AGGCGCAACG GGTCGCGCTC GCGCGGTCCC TCGCGCCGTC GCCGCGGCTG
CTCCTGCTCG ACGAGCCGCT GTCCGCGCTC GACCGTGCGC TGCGCGAGTC GCTCGCGCCC
CTGCTGCGCC GCGTGCTGCT CGCCGCGGGC ACGACCGCCC TGTACGTGAC GCACGACCAC
GACGAGGCGT TCACCGTCGC CGACCGCGTG GCCGTCATGC ACCGCGGCCG GCTGCTCCAG
GTCGACACGC CCGCCGCGCT CTGGGCTCGG CCGCGCGACG CCGACGTCGC GGCGTTCCTC
GGGTACGGCG TCGTGCCAGG GGGAGCTGGC CGCACGGGCG ACGGTCCCTC GGCCGCGGAT
GCCGGCGTCG TCGACGCTTC CGACGCCTCC GACGCCGGCG ACGACGGCGT CGCGCTCGCC
CTCCGGCCCG GCGCGCTGCG GGTCGTGCCT GGGGACGCCT CGGCGCGGCG CACCGGAGTC
GTGCGGGCCG TGCGCTTCCG GCGCGGGGCG GTCGAGGCGG TCCTCGACGT CGACGGCTGG
GGCGAGCAGG TCGCCGTCGT GCCGGCCGAG ATCGCCGTGC ACCCCGGCGA CGTCGTCACG
CTCGCCGTCG ACCCCGGCGG CGTGCTCCGG CTCCCGCGCC CCTGA
 
Protein sequence
MSAGLRVTDA VVTYGAGERR TTAVAGVSLA VSPGEVVALL GPSGCGKSSL LRAVAGLEPL 
AAGAVAWDDA DLAGVPVHRR SFGLMFQDGQ LFPHRDVAGN VAYGLPGVRR LPAAARAARV
DELLDLVGLT GFGRRAVSTL SGGEAQRVAL ARSLAPSPRL LLLDEPLSAL DRALRESLAP
LLRRVLLAAG TTALYVTHDH DEAFTVADRV AVMHRGRLLQ VDTPAALWAR PRDADVAAFL
GYGVVPGGAG RTGDGPSAAD AGVVDASDAS DAGDDGVALA LRPGALRVVP GDASARRTGV
VRAVRFRRGA VEAVLDVDGW GEQVAVVPAE IAVHPGDVVT LAVDPGGVLR LPRP