Gene Bcav_3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3796 
Symbol 
ID7860535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4212072 
End bp4212914 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content71% 
IMG OID643867899 
Producthypothetical protein 
Protein accessionYP_002883800 
Protein GI229822274 
COG category[R] General function prediction only 
COG ID[COG5564] Predicted TIM-barrel enzyme, possibly a dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGACC GACGTACCGA GCTCCTGGAT CGCCTGAACG CCAAGATCGC CGCCGGGGAC 
GCGATCATCG GCGGGGGCGC GGGAACCGGG CTCTCCGCGA AGTGCGCCGA GGCGGCGGGC
CTCGACCTCA TCGTCATCTA CAACTCGGGC CGGTACCGGA TGGCCGGTCG CAGCTCGATG
GCCGGACTCA TGCCGTACGG CGACGCGAAC GCCATCGTCA TGGAGATGGC GGACGAGGTC
CTCCCCGTCG TCGACCGGAT CCCCGTGTTC GCCGGCGTGT GCGGCACCGA CCCGTTCCGT
TCGATCCCGC GGTTCCTCGA CGACGTCGTG CGGGCCGGGT TCACCGGCGT CCAGAACTAT
CCGACGGTGT GCCTGTTCGA CGGGATGATC CGGGCGAACC TCGAGGAGAC CGGCCTCGGG
TTCGACAAGG AGGTCGACAT GATCGCGGCC GCTCGGGAGC GCGGCCTCGC GACGATGGCC
TACGTGGCGA ACGAGGACGA GGCCGTCGCG ATGACCGAGG CCGGGGCGGA CATCCTCGTT
CCGCACATGG GGCTCACGAC GTCCGGGATG ATCGGCGCCC GGACGGCGTT CACGCTCGAG
GACGCCGCCG AGCGGGTCGC GATCCTGCGC AAGGCGATCG TCGGCGTCCG CTCCTCCGCG
ATCGTCCTGT GCCACGGCGG CCCGATCGCC GCGCCCGACG ACGCCACGTT CGTCATCCAG
CAGGTCCCCG GCGTCCACGG GTTCCTGGGC GCCTCGAGCA TGGAGCGCCT GCCGACCGAG
GTCGCGATGG TCGACCACAT GAGCTCGTTC ACCCGGCTCC GGCTCGCCGC CGAGCGGGCC
TGA
 
Protein sequence
MSDRRTELLD RLNAKIAAGD AIIGGGAGTG LSAKCAEAAG LDLIVIYNSG RYRMAGRSSM 
AGLMPYGDAN AIVMEMADEV LPVVDRIPVF AGVCGTDPFR SIPRFLDDVV RAGFTGVQNY
PTVCLFDGMI RANLEETGLG FDKEVDMIAA ARERGLATMA YVANEDEAVA MTEAGADILV
PHMGLTTSGM IGARTAFTLE DAAERVAILR KAIVGVRSSA IVLCHGGPIA APDDATFVIQ
QVPGVHGFLG ASSMERLPTE VAMVDHMSSF TRLRLAAERA