Gene Bcav_3744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3744 
Symbol 
ID7859884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4162373 
End bp4163827 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content74% 
IMG OID643867847 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002883748 
Protein GI229822222 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.341849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC CCGCCCTGAG CCCTGGCCAC CTGAGCGGCC GCGACTGGGC AGCGCTCCTC 
GTGCTGTGCG GCGCGATCTT CCTCGAGGGC AGCGACGTCG CCATGCTCAC CGTCGCCCTC
CCGTCGATCC GGACGGACCT GGGCCTCGCG ACGAGCGAGC TGGGGGGCGT CCTCACGGCC
TACGTCGTGG GCTACGGCGG CTTCATGCTG CTCGGCGGGC GGGCGGCGGA CCTCTACGGG
CGCCGTCGGA TGTTCGTGCT GTGGCTCGTG GTCTTCCTCG TGTTCTCCGG GCTGGGCGGC
CTCGCCACCG AGGGTTGGAT GCTGCTCGTC GCCCGCCTCG TCACCGGGAT CGCCGCCGGC
TTCCTGACGC CGGCAGGCCT CTCGCTCATC ACCACGCAGT TCCCCGAGGG ACCGCGACGC
AACCGTGCGC TCATCATCTA CGGGGCGGCG GGGGCGGCCG GCTTCTCGCT CGGCCTCGTC
GTCGGCGGCC TCCTCAGCGC GATCCACTGG CGCTGGGTGT TCTTCGCCCC GGTCGTCCTG
TCGGTCGTCC TGCTCGTGCT CGCGGTCGCC GTGATCCGCC GCGACGCACC CGACCGGGGC
CGGGGCCGTC TCGACGCCGG TGGTGCGCTC ACCGCCACCG GCGCCATGGT CCTGCTGGCG
TTCGGGATCG TCCGCCTCGA GCACCTGGGC GACGAGCCCG TCCCGACGCT CGGCGCGCTC
GCCGGTGGCC TCGCGCTGCT CGTCGTCTTC GTGCTGCTGC AGCGCCGATC GCCGGACCCG
CTCGTGCGGC TCGGGCTGCT GCGCTGCGGC GTCCTCGTCC GCGCCAACAT CACGGCGCTC
GCGTTCGCCG GGGCGTTCTA CGGCTTCCAG TTCCTGCTCA CCCTGTACCT GCAGGAGATG
CGAGGCTGGA CCCCGCTGCA GACCGGCCTC GCCATGCTGC TCATGGCGAT CGACGCCGTC
CTCGCCCCCA CGCTGACACC CCGCCTCGTC GAACGCTTCG GCGTGGCTCG GGTCATCGTG
GGTGGCGGGC TCGCGGCGTT CGCCGCCGTC GCGCTCTTCG CGTTCGCCCG GCTCGACTGG
GTGTACGCGC TCATGGTCCC GTCGATGCTG CTCGTCGGCG TCGCGTTCGC CCTCGCCTAC
GGTCCGCTCG CGATCGCCGC GACCGACGGC GTCGCCGAAC GGGAGCAGGG GGTGGCGAGC
GGGCTGCTCA ACACGTCCTT CCAGCTCGGC GCCGCGATCG GGATCTCGAC GGCGACGCTC
GCGTTCACCG TGACGCTCGC CGGCCAGGGG TCGGCGGCCG TCCAGCTCGC CGCGTTCCGC
GTCGCGCTCG TGGTGCCGGC GGCGCTCGCC CTCGTCGCCG CCACGACCAT GGTGCTCCGC
GCGCGCCGTC GGCCGCTCGG GGCAGATGCC CCCGACGCAC CCGAGACCCG GGCCGAGGTA
CGCGTGCCGG GCTGA
 
Protein sequence
MTTPALSPGH LSGRDWAALL VLCGAIFLEG SDVAMLTVAL PSIRTDLGLA TSELGGVLTA 
YVVGYGGFML LGGRAADLYG RRRMFVLWLV VFLVFSGLGG LATEGWMLLV ARLVTGIAAG
FLTPAGLSLI TTQFPEGPRR NRALIIYGAA GAAGFSLGLV VGGLLSAIHW RWVFFAPVVL
SVVLLVLAVA VIRRDAPDRG RGRLDAGGAL TATGAMVLLA FGIVRLEHLG DEPVPTLGAL
AGGLALLVVF VLLQRRSPDP LVRLGLLRCG VLVRANITAL AFAGAFYGFQ FLLTLYLQEM
RGWTPLQTGL AMLLMAIDAV LAPTLTPRLV ERFGVARVIV GGGLAAFAAV ALFAFARLDW
VYALMVPSML LVGVAFALAY GPLAIAATDG VAEREQGVAS GLLNTSFQLG AAIGISTATL
AFTVTLAGQG SAAVQLAAFR VALVVPAALA LVAATTMVLR ARRRPLGADA PDAPETRAEV
RVPG