| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3740 |
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| Symbol | |
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| ID | 7859880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 4158158 |
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| End bp | 4159525 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643867843 |
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| Product | Pyridoxal-dependent decarboxylase |
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| Protein accession | YP_002883744 |
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| Protein GI | 229822218 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0339785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCAC GCGAGAGGGC GCTGTCGCGG GCCCACGATC ACGCCGTGGA CTGGCTCGCG
TCGCTCGGGT CCCGTCGCGT TCCGCCGCGG GCGACGACGG ACGAGGTCGC CACGGCTCTC
GGCCGCGATC TCCCGGACGG TCCCACCGAC CCGGCCGACG TCGTCGACCT CCTCGCCGCG
GCCAGCGACC CAGGTCTCAC GGCGATGCCC TCGGGCCGCT TCTACGGCAT GGTCATCGGC
GGCACTCACC CGGCGGCGCT CGCCGCGGAC TGGCTGGTCA GCGCGTGGGA CCAGAACGCC
GCCCTGAACG CCGTCACGCC AGCCGCCGCC GCGGCAGAAC AGGTGGCGAC GGCGTGGCTC
CTCGACCTCC TCGGCCTCCC GGGAGACGCG GCCGTGGGCC TCGCGACGGG TGCCACGATG
GCCAACTTCA CGTGTCTCGC CGCCGCACGC GACGCCGTCC TGCGCCGGCA CGGCTGGGAC
CAGGTGACGC GCGGCCTCAC AGGCGCGCCC CGGATCCGTG TGCTCGTCGG TGCCGAGAGG
CACGACAGCA TCGACCTGGT CCTGCGCTAC CTCGGCCTCG GCACCCCGCA CGCGGTCGCC
GTGGACGACC AGGGGCGCAT CCGCCCGGAC GCGCTGGCAG CCGCGCTCGG CGACGGCCCC
GCCGACGGCC CGGCGATCGT CGCGCTGCAG GCCGGGAACG TCCACTCCGG CGCGTTCGAC
CCGTTCGACG ACGCCGCCTC GCTCGCCCAC GAGCGCGGCG CCTGGGTGCA CGTGGACGGC
GCGTTCGGCC TCTTCGCCGC CGCCTCGCCG CGGCTGCGGC ACCTCACCCG CGGCCTCGCC
GACGCCGACT CCTGGGCCAC CGACGCCCAC AAGACCCTCA ACGTGCCGTA CGACTGCGGG
CTGGCGATCG TGCGTGACCG CAGTGCGCTC ACGACGGCGA TGAGCATGCA CGGCGACTAC
CTCATCCAGG ACGCCGCCGG GGACCCGTTC GACACGGTGC CCGAGCTGTC GCGGCGCTCG
CGGGCCGTGC CGGTCTGGGC AGTCCTGCGA TCCCTGGGAC GACGCGGCGT CGCCGAGCTC
GTCGAGCGCA TGGCGGACCA CGCCCAGGCC TTCGCGGAAG GCGTCGCCGC GATCGACGGC
GCCGAGGTCC TCAACGACGT CGTCTTCACG CAGGTCTGCG CGTCGTTCGG CTCGGACGAG
CGCACGCGCG AGGTCGTGCG TCGCGTGCTC GACGACGGCA CCGCTTGGAT GTCCGGATCA
CGCTGGCGCG ACCGCGCGGT GCTGCGGATC TCCGTGTGCA ACTGGTCGAC CACCGACGAC
GACGTCGGGC GCAGCCTCGA CGCCCTTCGG CGGGCCGCGG CGGGCTGA
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| Protein sequence | MDARERALSR AHDHAVDWLA SLGSRRVPPR ATTDEVATAL GRDLPDGPTD PADVVDLLAA
ASDPGLTAMP SGRFYGMVIG GTHPAALAAD WLVSAWDQNA ALNAVTPAAA AAEQVATAWL
LDLLGLPGDA AVGLATGATM ANFTCLAAAR DAVLRRHGWD QVTRGLTGAP RIRVLVGAER
HDSIDLVLRY LGLGTPHAVA VDDQGRIRPD ALAAALGDGP ADGPAIVALQ AGNVHSGAFD
PFDDAASLAH ERGAWVHVDG AFGLFAAASP RLRHLTRGLA DADSWATDAH KTLNVPYDCG
LAIVRDRSAL TTAMSMHGDY LIQDAAGDPF DTVPELSRRS RAVPVWAVLR SLGRRGVAEL
VERMADHAQA FAEGVAAIDG AEVLNDVVFT QVCASFGSDE RTREVVRRVL DDGTAWMSGS
RWRDRAVLRI SVCNWSTTDD DVGRSLDALR RAAAG
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