Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3727 |
Symbol | |
ID | 7859867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 4144374 |
End bp | 4146110 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643867830 |
Product | ABC transporter related |
Protein accession | YP_002883731 |
Protein GI | 229822205 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.202459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0336359 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGCGTGC TGCCCGACGA GGAGCTGCCG TCGCCCGGTG ACCGGGGCGG CGTCGCGTAC CTGTTCTGGC TGGCGCGCCG TCAGTGGCCG ACCATGCTCT GCGGCGTCGC GTTCGACCTC GTGTGGCTGC TCGGCCTGGC GGTCACGCCG TGGGCCGTGG GGCGTGCGAT CGACGACGGC ATCCTCGGCG GCGACTACGA CGCCCTCCTG CGCTGGGCCG GTCTGCTGCT GGTGGTCGCG CTCGTGCGCG CCTGGGCCGA GGCGATGCGC AACCGCGCCG GGATCTCCAA CTGGAACCAG GCGGCGTTCC GGTCCGTGCA GCTTCTCGGG CACCACCTGA CGCGCACGGG CGGGGCGGTG AACCGGACAC ACGCCGTGGG CGAGGTCCTC GCGGTGCAGG GCGACGCGTT CACGCTGGCC CGTGCCTACT TCCTGCTCGG CGGCCTGACG TCGGCGATCG CGAGCTACGT CGTCGTCGCC GTCATCGTCC TGCGGACCTC GGTGCCGCTC GGGGTCTTCG TGCTGGTCGG TGTGCCCGTG TTCGGCGCGC TCGTCTCGCT CGTGGCACGA CCGCTGCACC GCGCCCAGCA GGCGCAGCGC AAGGCCAGCG GCGAGATGAC GGAGGTGGCG GCCGACGCCG TCGCCGGCCT CCGCGTGCTG CGGGGCATCG GCGGCGAGCC GCAGTTCCTC GAGCGGTACC GCGAGCGGTC GGCGCGCACG CTCCGCACCG GATGGGCCAT GGCTCGCCCC GTCGCGCTGC TCGAGGGCCT CCAGGTGCTG CTCGGCGGGA TCCTCGTGGT CGTCCTGACC TGGGTCGGGG GCGTGCTCGT GGTGCGGGGC GACCTGCAGC CCGGCGAGCT CGTCACGTTC TACGGGTACG CCGCGTTCCT CCTGACTCCC GTGAACCTGG TCGCGGACAA CCTCATGACG GTCGTGCCCG CCGTCGTCGG CGCCGGCCGA CTCACCGGCC TCCTGCGCAC CCGCAGCGCG ACCCACGACG TCGGGACGGC GGCGCCGCCG TCGCCGGGAG CCGCCCTCGC GGACGCCGGA ACGGGCGTGG AGGTGCCGCC GCGCGGCCTG GTCGGGCTCG TCTCCTCCGA CCTCGTCGAG CCGCGGCGCC TGCTCGAGCG GCTCGCGCGC ACCGACGATG CGGCGCTCGC GACCAGTCCC GTGCGGTGGG GCGGCGTCGA CACCCGCGAC ATCCCGCTCC GCGACGTCCG CGCCCGCATC ATGCTCGTCG ACAGCCACCC GCACCTGTAC GCCGGCACGC TCCGCGACGC CGTCGACCCG TTCGGGCGGC ACACCGAGCG GCAGGTGCTC GACGCCGTCG ACGCCGCCTC GGCGCACGAC GTGCTCGACT CCCGCCCCGA CGGGATCGAC GGCGAGCTCC TGGAGGGCGG CCGGGACCTC TCGGGCGGCC AGCGGCAGCG GGTCGGCCTC GTGCGCGCCC TGCTCGCCGA CCCCGAGGTG CTCCTGCTCG ACGACCCGAC CTCCGCCGTC GACGCGCACA CCGAGGACCG CATCGCTGCC GGCCTGGTGA CGTACCGCCG CGCGGACTCA GCGACGGTCG TCGCCACCAC CAGCCCCGTG GTGCTGAGCC GGGCCGACGT CGTCCACTGG TTCGACGACG GCCGCGTGCT CACCGGAACG CACACCGAGC TCAGTGCGGA CGCCGGGTAC CGGCGCGCCG TGCTGCGCGC CCAGGCCACG AGCGCGGTGG GCGACGGCGA TGGCTGA
|
Protein sequence | MRVLPDEELP SPGDRGGVAY LFWLARRQWP TMLCGVAFDL VWLLGLAVTP WAVGRAIDDG ILGGDYDALL RWAGLLLVVA LVRAWAEAMR NRAGISNWNQ AAFRSVQLLG HHLTRTGGAV NRTHAVGEVL AVQGDAFTLA RAYFLLGGLT SAIASYVVVA VIVLRTSVPL GVFVLVGVPV FGALVSLVAR PLHRAQQAQR KASGEMTEVA ADAVAGLRVL RGIGGEPQFL ERYRERSART LRTGWAMARP VALLEGLQVL LGGILVVVLT WVGGVLVVRG DLQPGELVTF YGYAAFLLTP VNLVADNLMT VVPAVVGAGR LTGLLRTRSA THDVGTAAPP SPGAALADAG TGVEVPPRGL VGLVSSDLVE PRRLLERLAR TDDAALATSP VRWGGVDTRD IPLRDVRARI MLVDSHPHLY AGTLRDAVDP FGRHTERQVL DAVDAASAHD VLDSRPDGID GELLEGGRDL SGGQRQRVGL VRALLADPEV LLLDDPTSAV DAHTEDRIAA GLVTYRRADS ATVVATTSPV VLSRADVVHW FDDGRVLTGT HTELSADAGY RRAVLRAQAT SAVGDGDG
|
| |