Gene Bcav_3727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3727 
Symbol 
ID7859867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4144374 
End bp4146110 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content75% 
IMG OID643867830 
ProductABC transporter related 
Protein accessionYP_002883731 
Protein GI229822205 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.202459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0336359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGTGC TGCCCGACGA GGAGCTGCCG TCGCCCGGTG ACCGGGGCGG CGTCGCGTAC 
CTGTTCTGGC TGGCGCGCCG TCAGTGGCCG ACCATGCTCT GCGGCGTCGC GTTCGACCTC
GTGTGGCTGC TCGGCCTGGC GGTCACGCCG TGGGCCGTGG GGCGTGCGAT CGACGACGGC
ATCCTCGGCG GCGACTACGA CGCCCTCCTG CGCTGGGCCG GTCTGCTGCT GGTGGTCGCG
CTCGTGCGCG CCTGGGCCGA GGCGATGCGC AACCGCGCCG GGATCTCCAA CTGGAACCAG
GCGGCGTTCC GGTCCGTGCA GCTTCTCGGG CACCACCTGA CGCGCACGGG CGGGGCGGTG
AACCGGACAC ACGCCGTGGG CGAGGTCCTC GCGGTGCAGG GCGACGCGTT CACGCTGGCC
CGTGCCTACT TCCTGCTCGG CGGCCTGACG TCGGCGATCG CGAGCTACGT CGTCGTCGCC
GTCATCGTCC TGCGGACCTC GGTGCCGCTC GGGGTCTTCG TGCTGGTCGG TGTGCCCGTG
TTCGGCGCGC TCGTCTCGCT CGTGGCACGA CCGCTGCACC GCGCCCAGCA GGCGCAGCGC
AAGGCCAGCG GCGAGATGAC GGAGGTGGCG GCCGACGCCG TCGCCGGCCT CCGCGTGCTG
CGGGGCATCG GCGGCGAGCC GCAGTTCCTC GAGCGGTACC GCGAGCGGTC GGCGCGCACG
CTCCGCACCG GATGGGCCAT GGCTCGCCCC GTCGCGCTGC TCGAGGGCCT CCAGGTGCTG
CTCGGCGGGA TCCTCGTGGT CGTCCTGACC TGGGTCGGGG GCGTGCTCGT GGTGCGGGGC
GACCTGCAGC CCGGCGAGCT CGTCACGTTC TACGGGTACG CCGCGTTCCT CCTGACTCCC
GTGAACCTGG TCGCGGACAA CCTCATGACG GTCGTGCCCG CCGTCGTCGG CGCCGGCCGA
CTCACCGGCC TCCTGCGCAC CCGCAGCGCG ACCCACGACG TCGGGACGGC GGCGCCGCCG
TCGCCGGGAG CCGCCCTCGC GGACGCCGGA ACGGGCGTGG AGGTGCCGCC GCGCGGCCTG
GTCGGGCTCG TCTCCTCCGA CCTCGTCGAG CCGCGGCGCC TGCTCGAGCG GCTCGCGCGC
ACCGACGATG CGGCGCTCGC GACCAGTCCC GTGCGGTGGG GCGGCGTCGA CACCCGCGAC
ATCCCGCTCC GCGACGTCCG CGCCCGCATC ATGCTCGTCG ACAGCCACCC GCACCTGTAC
GCCGGCACGC TCCGCGACGC CGTCGACCCG TTCGGGCGGC ACACCGAGCG GCAGGTGCTC
GACGCCGTCG ACGCCGCCTC GGCGCACGAC GTGCTCGACT CCCGCCCCGA CGGGATCGAC
GGCGAGCTCC TGGAGGGCGG CCGGGACCTC TCGGGCGGCC AGCGGCAGCG GGTCGGCCTC
GTGCGCGCCC TGCTCGCCGA CCCCGAGGTG CTCCTGCTCG ACGACCCGAC CTCCGCCGTC
GACGCGCACA CCGAGGACCG CATCGCTGCC GGCCTGGTGA CGTACCGCCG CGCGGACTCA
GCGACGGTCG TCGCCACCAC CAGCCCCGTG GTGCTGAGCC GGGCCGACGT CGTCCACTGG
TTCGACGACG GCCGCGTGCT CACCGGAACG CACACCGAGC TCAGTGCGGA CGCCGGGTAC
CGGCGCGCCG TGCTGCGCGC CCAGGCCACG AGCGCGGTGG GCGACGGCGA TGGCTGA
 
Protein sequence
MRVLPDEELP SPGDRGGVAY LFWLARRQWP TMLCGVAFDL VWLLGLAVTP WAVGRAIDDG 
ILGGDYDALL RWAGLLLVVA LVRAWAEAMR NRAGISNWNQ AAFRSVQLLG HHLTRTGGAV
NRTHAVGEVL AVQGDAFTLA RAYFLLGGLT SAIASYVVVA VIVLRTSVPL GVFVLVGVPV
FGALVSLVAR PLHRAQQAQR KASGEMTEVA ADAVAGLRVL RGIGGEPQFL ERYRERSART
LRTGWAMARP VALLEGLQVL LGGILVVVLT WVGGVLVVRG DLQPGELVTF YGYAAFLLTP
VNLVADNLMT VVPAVVGAGR LTGLLRTRSA THDVGTAAPP SPGAALADAG TGVEVPPRGL
VGLVSSDLVE PRRLLERLAR TDDAALATSP VRWGGVDTRD IPLRDVRARI MLVDSHPHLY
AGTLRDAVDP FGRHTERQVL DAVDAASAHD VLDSRPDGID GELLEGGRDL SGGQRQRVGL
VRALLADPEV LLLDDPTSAV DAHTEDRIAA GLVTYRRADS ATVVATTSPV VLSRADVVHW
FDDGRVLTGT HTELSADAGY RRAVLRAQAT SAVGDGDG