Gene Bcav_3719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3719 
Symbol 
ID7859859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4137904 
End bp4138965 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content70% 
IMG OID643867822 
ProductMannonate dehydratase 
Protein accessionYP_002883723 
Protein GI229822197 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1312] D-mannonate dehydratase 
TIGRFAM ID[TIGR00695] mannonate dehydratase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.320611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.458256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAGC TGAGTGAGTT CCTGTCCCCG CGGCCCGAAC CGTGGTGGCC GCTCCTGCGC 
CAGGTCGGCG TCGAGCACGT CGTGGCCGTG ATGCGCGGCG CCGAACAGGA ACAGCGGATG
TATGCGGCGG TCGGCGGCGC AGCCGGTACG ACCTCCTGGG CCGTCGGTGA GGAACCGTGG
ACCGAGGCGT CGCTCCGAGC GGACATGGAG CTGTTCGCGA CCCATGGCTT CACCGTGGCC
GCGATCGAGG ACACGGCACC GATGGACGCC GTCCGCCTGG GACTGCCCGG CAGGGACGAG
CAGATCGAGC ACATTCTCAC CCAGGTCCGC GCCATGGGTC GCCTGGGGAT CCCGGTGCTC
TGCTACAACT GGATGGCCTT CTCCAGCTGG GCTCGGACCC GGAGCGCCGT CCCCACACGG
GGCGGAGCCC TCGTGACCGG CTTTCGACTC AGCGACACGG CGGACCTTCC GCCGCTCACT
GATCCCGCCG GGGTGACGCC CGACGTGCTC TGGGACGCGC TCGCCTACTT CCTGGACGCC
GTGCTCCCCG ACGCCGAAGA GGCAGGCGTG CGCCTGGCGC TCCATCCCGA CGACCCGCCG
CTCCCGGCGT TGCGGGGGGT ACCCCGAATC ATCAGCTCGC TCGACGCCTA CCGAAGGCTC
CTGCGGACGA GCTCCTCCCC GAGCAACGCC ATCACGTTCT GCCAGGGCAA CTTCGCGCTC
ATGACCGACG ACGTCCCAGC CGCCATCCGC GAGCTCGGCG GAAGCGACGC GATCGCGTTC
GTGCACTTCC GCGACCTACG CGGACGGGCT GACGACTTCG TCGAGGCGTT CCACGACGAC
GGGCAGACCG ATATGGGCGC GTGCCTCCGC GCGTACCGGG ACGTCGGGTT CTCGGGCCCC
CTGCGGCCGG ACCACGTGCC GACGCTCGAG GGCGAGTCGA ACGACCGTCC CGGCTACGGC
GTCCTGGGCC GTCTCTTCGC CACCGGATAC ATCCGGGGGC TCCAGCACGC GATCTACGGT
CGTCCGGGTG CGAGCCCGCT GGCCGGGACC TCAACTGGTT GA
 
Protein sequence
MFQLSEFLSP RPEPWWPLLR QVGVEHVVAV MRGAEQEQRM YAAVGGAAGT TSWAVGEEPW 
TEASLRADME LFATHGFTVA AIEDTAPMDA VRLGLPGRDE QIEHILTQVR AMGRLGIPVL
CYNWMAFSSW ARTRSAVPTR GGALVTGFRL SDTADLPPLT DPAGVTPDVL WDALAYFLDA
VLPDAEEAGV RLALHPDDPP LPALRGVPRI ISSLDAYRRL LRTSSSPSNA ITFCQGNFAL
MTDDVPAAIR ELGGSDAIAF VHFRDLRGRA DDFVEAFHDD GQTDMGACLR AYRDVGFSGP
LRPDHVPTLE GESNDRPGYG VLGRLFATGY IRGLQHAIYG RPGASPLAGT STG