| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3702 |
|---|
| Symbol | |
|---|
| ID | 7859842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 4118230 |
|---|
| End bp | 4120293 |
|---|
| Gene Length | 2064 bp |
|---|
| Protein Length | 687 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643867805 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_002883706 |
|---|
| Protein GI | 229822180 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.805436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.844675 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGTG CGACGACGCA GCGGATCCGC AACGTGGCCG TCGTCGGCCA CAGCGGCGCC
GGCAAGACCA CGCTCGTCGA GGCGCTGCTG CATCGTGCGG GCGCGATCGC CCGCCCCGGG
CGCGTCGAGG ACGGCAGCAC GGTGTGCGAC CACGAGCCGG AGGAGGTCAC GCACGGGATC
TCGATCGGGC TCGGCGTCGC GTCCGCCGAG TGGACCGCCT CCGACGGCGA GACGTACGCC
CTGACGTTCC TCGACACCCC CGGCTACGCG GACTTCGTGG GTGCCCGGGA CGCAGCGCTC
GGCGTCGCCG GTCTCGCCCT CGTCGTCGTG AGTGCCGTCG ACGGCGTCCA GGTCGGCACC
GAGGCGGCGT GGCGCGCGTG CGCGGAGGCG GGCCTGGCGC GGCTCGTCGT CGTGACCCAG
GAGGACAAGG CGCGCGCGGA CTTCCACCGG GTGCTCGACG AGCTGCGTGC CGCGTTCGGC
GACGCGATCC TGCCGCTGGA GCTGCCGCTC GGGGAGGAGT CGGCGTTCCG CGGCGTCGCC
GACGTGCTCA GCGACCGGGC GTACGCCTAC GACGGAGCGA ACGGCGACGG GAGCGGCCGC
GGGCACGACG AGCCGGTGCC TCCCGAGGTG GCCGACGAGG AACACCGCCT CCACGAGGAG
CTCACCGAGG AGATCGTCAC GCACGACGAC GACCAGCTCG AGCGCTACCT GGCCGGGGAC
GCCCCGGCCG CACCGGAGCT CGAGCGCACG TTCGCGCGCC AGGTGGCCGC CGGTGAGGCC
GTCGGAGTGC TGTGCTGCTC CGGCGCGACG GGGGTCGGCG TCGACCGGCT CGCGGACCTC
CTGTGCGAGA TCGGGCCGTC CCCCGCCGCG CGGCCGGCCG CCGTCACGAT CGCCGGGGAG
GCGAGCGCCG TCGAGCCCGA CGCCGCGGCC GACCCACTGC TTCACGTGTT CCGGACCGTG
GCCGACCCGT TCGTCGGGCA GGTGTCCGTG TTCAAGGTGC TCTCCGGGAC GGTCCCCTCG
GGCGGCCGGC TGGCGAACGC CGCGACGGGT GCGGAGGAAC GCCTGCACGG GCTGTTCCGG
CTGCGTGGGC GCGAGCACCT GCCCGTCGAG CGGCTCGTGG CGGGCGAGAT CGGCGCCGTC
GCAAAGCTCG CCGCCACCTC GACCGGCACG CTGCTCGCAG CTCGCCGCCT CCCCGTCAGC
GTCTCGGAGC GGCCCCGCCG CGCCGCCGTG TACGCGCTCG CGCTCGAACC CGTGTCGCAG
GCGGACGACG ACAAGCTGTC CTCGGCCCTG GCCCGCCTCA CGGCCGAGGA TCCGACGCTG
CGGAGCGAGC GCGTCGACGG GCAGAGCGTG CTCGCGGGCC TCGGCGACAC CCACCTGGCG
GTGGCGCTGG AGCGCCTGGC GCGCGTGTTC GGGGTACGGG TCACGACGGC GCCCGTGCGG
ATCCCCTTCC GCGAGACGAT CGCGCGGTCC GCCTCGGCCC AGGGCCGGCT CAAGAAGCAG
TCCGGCGGGC ACGGGCAGTT CGCGGTGGTC GAGCTCACGG TCGCTCCGCT GCCGCGGGGC
GGCGGGTTCG AGCTCATCGA CTCCGTGGTC GGCGGCGCGA TCCCGCGCTC GTACCTGCCC
GCCGTGCGCC GGGGGCTCGT CGAGGCGATG GCCGACGGCG GCCCCCACGG GTACCCGGTG
GTGGACGTCG CCGTCGAGGT CACGGGCGGC AAGTCCCACT CGGTCGACTC CTCCGACATG
GCGTTCCGCA CCGCCGCCGC GCTCGGGCTG AAGGAGGCGC TCGCGGCCGC CGGGACGATC
GTCCTCGAAC CGGTGAGCGA GGTGGCCGTC GTCGTCCCGT CGGCGACGCA GGGCGACGTG
CTCGGCGACC TGTCGGCGCG ACGCGGGCAC ATCACGTCCT CGGTGGTCCA GCCGGACGGG
TGGGTGCGCA TCGAGGCCTC GGTCCCGGCG TCGGAGCTCG TCCGCTACGC GCTCGACCTG
CGTTCGCTCA CCGGCGGGCG CGGTGAGTTC ACGGCCCTGC CGGCGTCCTA CGACGTCCTG
CCCAGCCACC TGGTCGGCGC CTGA
|
|---|
| Protein sequence | MVSATTQRIR NVAVVGHSGA GKTTLVEALL HRAGAIARPG RVEDGSTVCD HEPEEVTHGI
SIGLGVASAE WTASDGETYA LTFLDTPGYA DFVGARDAAL GVAGLALVVV SAVDGVQVGT
EAAWRACAEA GLARLVVVTQ EDKARADFHR VLDELRAAFG DAILPLELPL GEESAFRGVA
DVLSDRAYAY DGANGDGSGR GHDEPVPPEV ADEEHRLHEE LTEEIVTHDD DQLERYLAGD
APAAPELERT FARQVAAGEA VGVLCCSGAT GVGVDRLADL LCEIGPSPAA RPAAVTIAGE
ASAVEPDAAA DPLLHVFRTV ADPFVGQVSV FKVLSGTVPS GGRLANAATG AEERLHGLFR
LRGREHLPVE RLVAGEIGAV AKLAATSTGT LLAARRLPVS VSERPRRAAV YALALEPVSQ
ADDDKLSSAL ARLTAEDPTL RSERVDGQSV LAGLGDTHLA VALERLARVF GVRVTTAPVR
IPFRETIARS ASAQGRLKKQ SGGHGQFAVV ELTVAPLPRG GGFELIDSVV GGAIPRSYLP
AVRRGLVEAM ADGGPHGYPV VDVAVEVTGG KSHSVDSSDM AFRTAAALGL KEALAAAGTI
VLEPVSEVAV VVPSATQGDV LGDLSARRGH ITSSVVQPDG WVRIEASVPA SELVRYALDL
RSLTGGRGEF TALPASYDVL PSHLVGA
|
|---|
| |