| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3688 |
|---|
| Symbol | |
|---|
| ID | 7861030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 4104947 |
|---|
| End bp | 4105942 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643867791 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_002883692 |
|---|
| Protein GI | 229822166 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.110663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCGG GTGCGGCAGA GAGACCGACG GCGGCGGGGG TCGGCCCGCG GGCGTCGCTG
TCCGGCGTCG CGCTCGGCCT GGTCGCTGCG GCGGCGTTCG GCACGTCCGG GATCGCGGCG
CGACCGCTGC TCGACGCCGG CTGGTCGCCG ACCGCCGCCG TCCTCGTCCG GATCGGCGTC
GCGGCGCTGC TGCTGGCCGG CCCGGCGGTC TGGATCCTGC GGCGCGACGG CGTGGCCGGC
CTGCGCGGCA AGGTGCGGCT GCTCGTTCTG TTCGGCGTCT TCGGCGTCGC CGGCGCGCAG
GTCTGCTACT TCAACGCCGT CCAGCACCTC TCGGTGGGCG TCGCGCTGCT CATCGAGTAC
TCCGGGATCC TCCTCGTGGT CGCGTGGAAC TGGCTGCGCG GCCTCGTCCC GGCGCGGATC
ACCCTCGCGG GAGCGGCGAT CGCCGTCGTC GGCCTCGCCC TCGTGCTCGA CGCCTTCGGC
GGCGCGGAGG TCTCCGCCAC CGGGGTGCTG TGGGCGTTCG GTGCCGCCGT CGGGCTCGCC
GTGTACTTCG TGATCGGCGC GCGCACGGAG GACGGCGTGC ATCCGATCGT CATGGTGAGC
TCCGGCATGG TCGTCGGTGC CGTGGCGCTC GGCCTGCTCG GCGCCGTCGG GCTCATGCCG
GTGGTGATCG GCGCGGCCGA GGTGACGCTC CTCGGAAACG AGATCCCCGC CGTCGTCGTC
CTGCTGTGGC TCTGCCTCGT GACGGCGGTG CTGGCGTACG TGGCCGGCGT CGTCGCCAGC
CGTCGGCTCG GCTCGACCAC CGCCTCGTTC CTCGGCCTGA CCGAGGTGCT GTTCGCCGTC
GTCTTCGCGT GGCTGCTGCT CGCGGAGGTG CCCTCGCCGG TCCAGCTGCT GGGCGGCGTC
GCCGTCCTGA TCGGCGTGGT CCTCGTGCGG CTCGGGGAGC TGCGCAGGAG CCGCCCGCCG
ACGGACCTCG CGGGCGTTGC CGTCGGCGAC CCGTAG
|
|---|
| Protein sequence | MSAGAAERPT AAGVGPRASL SGVALGLVAA AAFGTSGIAA RPLLDAGWSP TAAVLVRIGV
AALLLAGPAV WILRRDGVAG LRGKVRLLVL FGVFGVAGAQ VCYFNAVQHL SVGVALLIEY
SGILLVVAWN WLRGLVPARI TLAGAAIAVV GLALVLDAFG GAEVSATGVL WAFGAAVGLA
VYFVIGARTE DGVHPIVMVS SGMVVGAVAL GLLGAVGLMP VVIGAAEVTL LGNEIPAVVV
LLWLCLVTAV LAYVAGVVAS RRLGSTTASF LGLTEVLFAV VFAWLLLAEV PSPVQLLGGV
AVLIGVVLVR LGELRRSRPP TDLAGVAVGD P
|
|---|
| |