| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3678 |
|---|
| Symbol | |
|---|
| ID | 7861020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 4091222 |
|---|
| End bp | 4092535 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643867781 |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_002883682 |
|---|
| Protein GI | 229822156 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.64554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.322426 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAGG AGTCGAACGC TGCGCGCCCG GGCACGGGAG CGTCGGTGAG CCGGCGCACG
GTGCTGGCAG GGGGTCTCGC CGGTGGCCTG GCCCTGGCCG GGGCGCCGCT CGCGGCGGCA
GCGCCGCGCG GGCCGGGCGG CCCCGGACGT CGCGACCTGC GGGTCATGAC GTGGAACATC
CACACCGCCG TCGCACCCGA TGCCCCCGGC GTGGTGGACG AGCCCCGCAT CGCCGCCGTG
ATCCGCGCGG AGGCGCCCGA CGTCGTCGTC CTCAACGAGG TGCACCGCGA TGCGCCCGGC
CCCGGCAGCC ACGGGGACCA GCCCGCGCGC CTCGCCGAGC TCCTCGCCGC CGACGGGTAC
GTCCACACGT GGTTCGGCCT GACGGAGGTG GACCTGCCGC ACGAGGGCGC CGTCCTTCCC
GGGTCCAGCA ACGGGAACGT CGTGATGTCG CGGCACCCGT TCGTCGGAGG CGGCGTGGTG
GTCCCGCTGC CGAACGAGAA CTACGAGCCC GGCGGGAAGC TGCGCCGCAG CCTGCTCACG
GTGACGGTCG ACGTGCCCGG GCTCGGCGAC GTCGTCGTCC ACGCCACGCA CCTCAGCACG
CCGGGCAGCG CCGTCCTCGT CGAGGACCAG AAGGAGCAGC TGCGGATCGT CCTCGACCAC
GTGGACGCGC GCGTGCCGAG CGTGCTCGCC GGCGACCTCA ACATCTGGAC CACCGACGTG
CCGACGCAGC CGTACTCGCA GAACAACCTC ATGCAGTCGT GGATCGCCGA GGACCACCTC
GCCGACACGT GGCGTCAGGT GAACGACCCG GGCGCCGGTC CGACGATGAC GGCGTCCTAC
GGCCGGCCCG AGTCGCCGCA CCCGGACCGC CGGATCGACT ACGTCTTCGC GACGCCGGCG
TTCGACGTCG TCGCCGGCCA CGTCTCCCTC GTCGACCGGT TCGCCTCCGA CCACCTCGGC
GTGGTCATGG ACCTCCGGCT CGGCGGCGCA CCGGTCGCGG CCCGCACGGT GCTCGCCGGT
GAGGACGGGC TCGACGGCTG GGCGCAGCTG ACCGCGTCGC GCCCCGGCCG CCTACGGCTG
TCCGTGTGCA AGAACCGCGG CCAGGCCGAC GACGACGGGA CCGCCGTCCG GGCAGTCCTG
CGCAACCGCG CGGGCGTCGC CCTGCGGACC GTCACCGACT CCGGCACGTC CCGCGACCGG
TGCACCGTCG AGACGTGGCG CGGTGCCCTG CCGCCGGGGG CGAGGCTCGA GGCGTGCCTC
GTCGGCGCGG ACGGGACGAT CCTCGCCAGC CGGACCGAGA CCCTGCACGC CTGA
|
|---|
| Protein sequence | MTEESNAARP GTGASVSRRT VLAGGLAGGL ALAGAPLAAA APRGPGGPGR RDLRVMTWNI
HTAVAPDAPG VVDEPRIAAV IRAEAPDVVV LNEVHRDAPG PGSHGDQPAR LAELLAADGY
VHTWFGLTEV DLPHEGAVLP GSSNGNVVMS RHPFVGGGVV VPLPNENYEP GGKLRRSLLT
VTVDVPGLGD VVVHATHLST PGSAVLVEDQ KEQLRIVLDH VDARVPSVLA GDLNIWTTDV
PTQPYSQNNL MQSWIAEDHL ADTWRQVNDP GAGPTMTASY GRPESPHPDR RIDYVFATPA
FDVVAGHVSL VDRFASDHLG VVMDLRLGGA PVAARTVLAG EDGLDGWAQL TASRPGRLRL
SVCKNRGQAD DDGTAVRAVL RNRAGVALRT VTDSGTSRDR CTVETWRGAL PPGARLEACL
VGADGTILAS RTETLHA
|
|---|
| |