| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3673 |
|---|
| Symbol | |
|---|
| ID | 7861015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 4085828 |
|---|
| End bp | 4086664 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643867776 |
|---|
| Product | transcriptional regulator, IclR family |
|---|
| Protein accession | YP_002883677 |
|---|
| Protein GI | 229822151 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.146603 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAGA CCCGACCAGC CGCCCCGCGC CGCGACACGA CGTCGCCCAC CCCGCGCACG
GCGATCCAGG CGATCGACCG CAGCGTGGCA CTGCTCGACA CGATCGCCGA CGCCGGCCCG
CACGGCGCCG CGCTCGGCGC GCTCGCCGAG TCCACCGGGC TCCCGGCGTC GACGGCGCGC
ACCCTGCTCT CCTCGCTCGT CGCGCACGGC CTCGTCGCCC AGGGCGGCAG CGGGCGCCGC
TACCTGCTCG GCTCCCGGTT CTTCGAGCTC AACCGCCGGT TCGTCGCCCA GACCGACCTG
TCCGCCGTCG CCGCACCCGT GCTGCGCGCG CTCTGGGAGC GCACCGAGGA GACGGTCCAC
CTCGCCGTCC TCCAGGGGAC CCGCCGCGTC GACATCGCCG TGCTCGTCGG TCCCCAGCTG
CTCACCGTCA GCCCGACGTC GGCGCGGTTC ACCGACTCCT CCGCCACGCC GCTGTACCGG
ACCGCAGCCG GGAAGGTGCT GTTCGCCGGG CTGAGCCGAC CGGACCGCCT CTCGATGCTC
GACGACGCCC CGTGGGACCC GCAGGACCGG CCGGCCGCGG AGGACCTCAT GGCCGCGATG
GACGACGTCG CCGCCGGCGG GTTCGCCACG AACCTCCAGG AGGAGGCCGC CGGCGTCTGC
GGCGTGGCCG CACCCGTCCA GGACCAGGGC GGCCGCACGA TCGCCGCGGT CTGCCTCGGG
TACCCCGCCG TGCGGCACAC GGAGGCCCAC GCGGCGTGGT TGCGGGACGA GGCCATGGAC
GCCGCAGCCG AGCTCACCGT GCTTCTCGGC GCCGCCACCG GGGAGGCCAG CGCATGA
|
|---|
| Protein sequence | MPETRPAAPR RDTTSPTPRT AIQAIDRSVA LLDTIADAGP HGAALGALAE STGLPASTAR
TLLSSLVAHG LVAQGGSGRR YLLGSRFFEL NRRFVAQTDL SAVAAPVLRA LWERTEETVH
LAVLQGTRRV DIAVLVGPQL LTVSPTSARF TDSSATPLYR TAAGKVLFAG LSRPDRLSML
DDAPWDPQDR PAAEDLMAAM DDVAAGGFAT NLQEEAAGVC GVAAPVQDQG GRTIAAVCLG
YPAVRHTEAH AAWLRDEAMD AAAELTVLLG AATGEASA
|
|---|
| |