Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3667 |
Symbol | |
ID | 7861009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 4080453 |
End bp | 4081352 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643867770 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002883671 |
Protein GI | 229822145 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGGTGA GACACATCGA CAGCGACCGC CCGGATCCCG CGACCGAGGC GTTCGTCGCC CACCGCAACC TGCTCTTCAC CGTGGCGTAC GAGATGCTCG GCTCGGCGGC CGATGCCGAG GACGTCCTGC AGGAGACGTG GCTGAAGTGG GTCGGCGTCG ACCTCGCGCT GGTACGCGAT CCGCGCGCGT ACCTCGTCCG GATCACGACC CGCCAGGCGC TGACCCGGCT TCGGTCGCTC AGCCGACGCA AGGAGTCGTA CGTCGGCACC TGGTTGCCCG AACCGTTGCT GACCGCGCCC GACGCCGCAC AGGACGTGGA GCTGGCCGAG AGCGTCTCGA TGGCGATGCT GCTGGTGCTG GAGACGCTGA AGCCGACCGA GCGGGCGGTG TTCGTGCTGC GCGAGGTGTT CGACCTGTCC TACGACGAGG TCGCCGAGGC CGTCGGCAAG ACGCCGGCCG CCGTCCGGCA GATCGCTCAT CGGGCTCGGT CGCACGTCGC GGCGCGACGA CCGCGCGAGC ACGTCTCCCC CGCCGAGACG CGGGCCGTGC TCGCCGCGTT CCGGAGCGCG CTCGAGACCG GTGACCTGCG ACGTCTGCTG GACGTGATGG CGCCCGACGT CGTCTTCCTC GCCGACGGCG GCGGCGTCGT GCGGGCCGCT CTGGAACCGG TCGTCGGCTC CGATGACGTG GGGCGCTTCC TGGGGGGCGT CGCCGAGCGC ATGGGGTCGC TGCGGATCGT GGAGGTCAAC GGCCACCCGG CGCTGCTCTT CGAGCGCGAC GGCGCGGTCG AGACCGTCAT GGCGGTGCGG GTGGAGCGCG GCCTGATCTC CGGGCTCTAC GCCGTGCGCA ACCCCGCCAA GCTGTCGCAC CTGGGGCAGG AGACGACCCT GAGCCGCTGA
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Protein sequence | MRVRHIDSDR PDPATEAFVA HRNLLFTVAY EMLGSAADAE DVLQETWLKW VGVDLALVRD PRAYLVRITT RQALTRLRSL SRRKESYVGT WLPEPLLTAP DAAQDVELAE SVSMAMLLVL ETLKPTERAV FVLREVFDLS YDEVAEAVGK TPAAVRQIAH RARSHVAARR PREHVSPAET RAVLAAFRSA LETGDLRRLL DVMAPDVVFL ADGGGVVRAA LEPVVGSDDV GRFLGGVAER MGSLRIVEVN GHPALLFERD GAVETVMAVR VERGLISGLY AVRNPAKLSH LGQETTLSR
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