Gene Bcav_3667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3667 
Symbol 
ID7861009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4080453 
End bp4081352 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content72% 
IMG OID643867770 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002883671 
Protein GI229822145 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGTGA GACACATCGA CAGCGACCGC CCGGATCCCG CGACCGAGGC GTTCGTCGCC 
CACCGCAACC TGCTCTTCAC CGTGGCGTAC GAGATGCTCG GCTCGGCGGC CGATGCCGAG
GACGTCCTGC AGGAGACGTG GCTGAAGTGG GTCGGCGTCG ACCTCGCGCT GGTACGCGAT
CCGCGCGCGT ACCTCGTCCG GATCACGACC CGCCAGGCGC TGACCCGGCT TCGGTCGCTC
AGCCGACGCA AGGAGTCGTA CGTCGGCACC TGGTTGCCCG AACCGTTGCT GACCGCGCCC
GACGCCGCAC AGGACGTGGA GCTGGCCGAG AGCGTCTCGA TGGCGATGCT GCTGGTGCTG
GAGACGCTGA AGCCGACCGA GCGGGCGGTG TTCGTGCTGC GCGAGGTGTT CGACCTGTCC
TACGACGAGG TCGCCGAGGC CGTCGGCAAG ACGCCGGCCG CCGTCCGGCA GATCGCTCAT
CGGGCTCGGT CGCACGTCGC GGCGCGACGA CCGCGCGAGC ACGTCTCCCC CGCCGAGACG
CGGGCCGTGC TCGCCGCGTT CCGGAGCGCG CTCGAGACCG GTGACCTGCG ACGTCTGCTG
GACGTGATGG CGCCCGACGT CGTCTTCCTC GCCGACGGCG GCGGCGTCGT GCGGGCCGCT
CTGGAACCGG TCGTCGGCTC CGATGACGTG GGGCGCTTCC TGGGGGGCGT CGCCGAGCGC
ATGGGGTCGC TGCGGATCGT GGAGGTCAAC GGCCACCCGG CGCTGCTCTT CGAGCGCGAC
GGCGCGGTCG AGACCGTCAT GGCGGTGCGG GTGGAGCGCG GCCTGATCTC CGGGCTCTAC
GCCGTGCGCA ACCCCGCCAA GCTGTCGCAC CTGGGGCAGG AGACGACCCT GAGCCGCTGA
 
Protein sequence
MRVRHIDSDR PDPATEAFVA HRNLLFTVAY EMLGSAADAE DVLQETWLKW VGVDLALVRD 
PRAYLVRITT RQALTRLRSL SRRKESYVGT WLPEPLLTAP DAAQDVELAE SVSMAMLLVL
ETLKPTERAV FVLREVFDLS YDEVAEAVGK TPAAVRQIAH RARSHVAARR PREHVSPAET
RAVLAAFRSA LETGDLRRLL DVMAPDVVFL ADGGGVVRAA LEPVVGSDDV GRFLGGVAER
MGSLRIVEVN GHPALLFERD GAVETVMAVR VERGLISGLY AVRNPAKLSH LGQETTLSR