Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3641 |
Symbol | |
ID | 7860983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 4054017 |
End bp | 4054685 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643867744 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_002883645 |
Protein GI | 229822119 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.89326 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCGTG ACGACGAGTC GGGGCACGAG CGGCCGCAGG ACCAGGAGCG CGAGGTCGGC GTCGGGCCGT GGCCGGGCGG GCGCGGCACC TGGCCCGACG ATCCCCGGTA CGACCCGGAG CTGCTCGCGC ACGGCGACCG GCGCAACGTC GTCGACGCCT ACCGGTACTG GCGCCTGCAG GCGATCGTCG CCGACCTCGA CACCCGCCGG CACCCGTTCC ACGTCGCGAT CGAGAACCTG CGGCACGACC TCAACATCGG CTCCATCGTG CGCAGCGCCA ACGCGTTCGG CGCCGCGCGG GTGCACGTGG TGGGCCGACG GCGGTGGAAC CGTCGCGGCG CGATGGTCAC CGACCGGTAC CAGCACGTCG ACCACCACGC CGACGCCGGC GCGCTCGCCG TCTGGGCCGA GCTGGCTGGC CTGCCGATCG TCGCGATCGA CAACGTCCCC GGCTCGACGC CGCTCGAACG GGGCGGCCTG CCCCGGGCCT GCGTCCTGCT CTTCGGTCAG GAGGGTGCCG GCCTGACCGC CGACGCCCTC GAGGCGGCCG CCGAGGTGCG GCACATCACC CAGTTCGGCT CGACGCGCTC GGTGAACGCC GGCGCCGCAG CCGCCGTCGC GATGCACGCC TGGGTCCAGG AGCACGCGGA CCCGAGCGCC TGGGCCTGA
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Protein sequence | MERDDESGHE RPQDQEREVG VGPWPGGRGT WPDDPRYDPE LLAHGDRRNV VDAYRYWRLQ AIVADLDTRR HPFHVAIENL RHDLNIGSIV RSANAFGAAR VHVVGRRRWN RRGAMVTDRY QHVDHHADAG ALAVWAELAG LPIVAIDNVP GSTPLERGGL PRACVLLFGQ EGAGLTADAL EAAAEVRHIT QFGSTRSVNA GAAAAVAMHA WVQEHADPSA WA
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