Gene Bcav_3641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3641 
Symbol 
ID7860983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4054017 
End bp4054685 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content75% 
IMG OID643867744 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_002883645 
Protein GI229822119 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.89326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGTG ACGACGAGTC GGGGCACGAG CGGCCGCAGG ACCAGGAGCG CGAGGTCGGC 
GTCGGGCCGT GGCCGGGCGG GCGCGGCACC TGGCCCGACG ATCCCCGGTA CGACCCGGAG
CTGCTCGCGC ACGGCGACCG GCGCAACGTC GTCGACGCCT ACCGGTACTG GCGCCTGCAG
GCGATCGTCG CCGACCTCGA CACCCGCCGG CACCCGTTCC ACGTCGCGAT CGAGAACCTG
CGGCACGACC TCAACATCGG CTCCATCGTG CGCAGCGCCA ACGCGTTCGG CGCCGCGCGG
GTGCACGTGG TGGGCCGACG GCGGTGGAAC CGTCGCGGCG CGATGGTCAC CGACCGGTAC
CAGCACGTCG ACCACCACGC CGACGCCGGC GCGCTCGCCG TCTGGGCCGA GCTGGCTGGC
CTGCCGATCG TCGCGATCGA CAACGTCCCC GGCTCGACGC CGCTCGAACG GGGCGGCCTG
CCCCGGGCCT GCGTCCTGCT CTTCGGTCAG GAGGGTGCCG GCCTGACCGC CGACGCCCTC
GAGGCGGCCG CCGAGGTGCG GCACATCACC CAGTTCGGCT CGACGCGCTC GGTGAACGCC
GGCGCCGCAG CCGCCGTCGC GATGCACGCC TGGGTCCAGG AGCACGCGGA CCCGAGCGCC
TGGGCCTGA
 
Protein sequence
MERDDESGHE RPQDQEREVG VGPWPGGRGT WPDDPRYDPE LLAHGDRRNV VDAYRYWRLQ 
AIVADLDTRR HPFHVAIENL RHDLNIGSIV RSANAFGAAR VHVVGRRRWN RRGAMVTDRY
QHVDHHADAG ALAVWAELAG LPIVAIDNVP GSTPLERGGL PRACVLLFGQ EGAGLTADAL
EAAAEVRHIT QFGSTRSVNA GAAAAVAMHA WVQEHADPSA WA