Gene Bcav_3634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3634 
Symbol 
ID7860976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4046639 
End bp4047787 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content73% 
IMG OID643867737 
Productnuclease (SNase domain protein) 
Protein accessionYP_002883638 
Protein GI229822112 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.322659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCTTCC TCGCCGGGCT GAGTGCTGCC CAGAAGTTCC TTGCTGTCCT CGCGAGTGGC 
GCGGTCGTGG CGGCTGTGGC CGTCGTCGCG ACGGCCTCGT CCGCTCCGGA TGCGGCGACC
GCCGTTGTCA CCCGAATCGT CGACGGCGAC ACGGTCGACG TCGCCGTGGA CGGCGAGGAG
CGCCGTGTCC GGCTGCTCAA CGTGGACACG CCGGAGAGCG TGGACCCGAA CACCCCACCC
GAGTGCCTAG GAGCGGAGGC GACGACGTAC CTCGCCGACC TGCTGCCGAT CGGCGCCGAG
GTGACGCTCG AGTACGACCG TGAACGACAG GACTCCTACG GCCGGGATCT CGCCGGGGTG
TTCCTGGACG GGACGCTGGT CAATGCAGAG ATCGCTCGCG CAGGATTCGG TGCAGCCGTG
CTGTACGAGC CGAACGACCG CTTCTACGAC GACGTCCTCG CTGCGCAGGA AGAGGCGGCG
GCCGCGCAGG TCGGGCTGTT CGACCCCGCG ATCGAGTGCA CCGTTCCGGC GCAGATGGCG
GCGTTCACCT CGGCCGCCGA GTCGGTGCCG GCCACCCCGG CGGGGACCGA CGTCGCGGCC
CTCGAGCAAC ACGGTGCCGC GCTCGCGGCG GCTCTCGCGA TCGGCGTCGG CCTGGGCGAG
GTTCTCGACG GCGACCGCAG CGGCTTCCCG CTCCTGCCGT TTTCGGGTCG CCTCGACGCC
ATGCGCGAGG AGGTGTCCAG CCAGGTCGAC CAGCTCGACG CCGATGCCGT GGCGAACGAC
GCTGCGATCA CCGCGGAGCG GGACCGACTC GAGGCGGAGC GCGTCGCCGC GGAGGAGGCA
GCGCGTCAGG CGGCGGAGGA AGAGGCGGCC CGCCAGGCTG CCGAAGAGCA GGCCCATCGC
GACGCGGCCG CCGATGCGGA GCGTGAGGCG GAGAGCGGTT CCGGCGGCTC CGCACCCGCT
CCGGCGCCCG CACCCGCCCC GGCGCCCGCA CCAGACCCCG CGCCCGCGCC AGACCCGGGG
TCAGGCGGCG GCTACGACGG ATACACGGGT TGCCGCGCCT ACGGCGGAGG CTACGTCCCG
AACGCCGTCG ACGAGCAGGG TCGCCCGTAC ACGAAGATCG ACTGCGACAC GCGTCAGCCG
ATCGGCTGA
 
Protein sequence
MSFLAGLSAA QKFLAVLASG AVVAAVAVVA TASSAPDAAT AVVTRIVDGD TVDVAVDGEE 
RRVRLLNVDT PESVDPNTPP ECLGAEATTY LADLLPIGAE VTLEYDRERQ DSYGRDLAGV
FLDGTLVNAE IARAGFGAAV LYEPNDRFYD DVLAAQEEAA AAQVGLFDPA IECTVPAQMA
AFTSAAESVP ATPAGTDVAA LEQHGAALAA ALAIGVGLGE VLDGDRSGFP LLPFSGRLDA
MREEVSSQVD QLDADAVAND AAITAERDRL EAERVAAEEA ARQAAEEEAA RQAAEEQAHR
DAAADAEREA ESGSGGSAPA PAPAPAPAPA PDPAPAPDPG SGGGYDGYTG CRAYGGGYVP
NAVDEQGRPY TKIDCDTRQP IG