Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3624 |
Symbol | |
ID | 7860966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 4034353 |
End bp | 4035519 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643867727 |
Product | L-rhamnose isomerase |
Protein accession | YP_002883628 |
Protein GI | 229822102 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4952] Predicted sugar isomerase |
TIGRFAM ID | [TIGR02635] L-rhamnose isomerase, Streptomyces subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000224876 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0801622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCTCG CCCCCGCCGT CGCCGAACGG CTCGCCGTCC AGGAGATCGA GCTGCCGTCC TGGGCGTTCG CCAACTCCGG CACACGCTTC CGCGTGTTCG GGCAGCCGGG CGTCCCCCGC ACACCGCAGG AGAAGATCGC CGACGCCGCG CAGGTGCACG CACTGACCGG CCTCGCTCCG CGGGTCGCGC TGCACATCCC GTGGGACCTC GTCGACGACT TCGGCGCGCT GGCCACCTTC GCCGCCGACC ACGGCGTCGG CATCGGGACG ATCAACTCCA ACACGTTCCA GGACGACGCC TACAAGCTTG GCAGCCTGTG TCACAGCGAT CCCGGCGTGC GGCGGAAGGC GATCGACCAC CACCTCGCCT GCGTCGACGT CATGGACGCC ACGGGTTCCA CGGACCTCAA GATCTGGCTG GCGGACGGCA CGAACTACCC CGGCCAGGAC GACATGCGCG CCCGGCAGGA CCGCCTCGCA GAGGGGCTCG CCGAGATCTA CGCCCGGCTG GGCGAGCACC AGCGGATCGT GCTCGAGTAC AAGTTCTTCG AGCCGGCGTT CTATCACACG GACGTGCCCG ACTGGGGCAC CTCGCTCGTC CAGTGCCTGG CCCTCGGCGA CCGCGCCGTC GTCTGCCTCG ACACCGGGCA CCACGCGCCC GGCACCAACA TCGAGTTCAT CGTCATGCAG CTGCTGCGCC TGCGAAAGCT CGGCGCGTTC GACTTCAACT CACGGTTCTA CGCCGACGAC GACCTCATCG TCGGCGCGGC CGACCCGTTC CAGCTGTTCC GCATCCTCCT CGAGGTGGTC CGCGGGGGCG GGTACGGCCC GGACAGCGGC GTCACGTTCA TGCTCGACCA GTGCCACAAC ATCGAGCAGA AGATCCCCGG CCAGATCCGG TCGGTGCTCA ACGTGCAGGA GGCGACGGCG AAGGCTCTGC TGGTCGACCG GGCCGCGCTC GACCGAGCGC AGCGCGACGG CGACGTCCTC GCCGCGAACG GCATCCTCAT GGACGCGTTC GCGACCGACG TCCGGGCCGA CCTCGCCGAC TGGCGGGAGA GTCGCGGCCT GCCGGCCGAC CCGATGGCCG CCTATGCGGC GAGCGGCTAC CAGGCCAGGA TCGAGGCAGA GCGCGTCGGC GGCGAGCAGG CCGGCTGGGG CGCCTGA
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Protein sequence | MSLAPAVAER LAVQEIELPS WAFANSGTRF RVFGQPGVPR TPQEKIADAA QVHALTGLAP RVALHIPWDL VDDFGALATF AADHGVGIGT INSNTFQDDA YKLGSLCHSD PGVRRKAIDH HLACVDVMDA TGSTDLKIWL ADGTNYPGQD DMRARQDRLA EGLAEIYARL GEHQRIVLEY KFFEPAFYHT DVPDWGTSLV QCLALGDRAV VCLDTGHHAP GTNIEFIVMQ LLRLRKLGAF DFNSRFYADD DLIVGAADPF QLFRILLEVV RGGGYGPDSG VTFMLDQCHN IEQKIPGQIR SVLNVQEATA KALLVDRAAL DRAQRDGDVL AANGILMDAF ATDVRADLAD WRESRGLPAD PMAAYAASGY QARIEAERVG GEQAGWGA
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