Gene Bcav_3594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3594 
Symbol 
ID7860858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3997813 
End bp3998736 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content73% 
IMG OID643867697 
Productphosphoribosylaminoimidazole- succinocarboxamides ynthase 
Protein accessionYP_002883598 
Protein GI229822072 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGACG CCCCGCCGCC CGCCGCCCCT CAGGTCCCCG GCTGGCGGCA CGTCGCCTCC 
GGCAAGGTCC GCGACCTGTA CGTGCCGGAC GCCCCGCCGG CCGGATCGCT CGCCGTCGAA
CCGGCCGACG CCGTCGTCCT CCTCGTCGCG AGCGACCGCA TCAGCGCGTA CGACTACGTG
CTCCCGACGC CGATCCCCGA CAAGGGCGCG ATCCTCACGG CGCTCAGCGT GTGGTGGTTC
GAGCAGCTCG CCGACGTCGT CCCGAACCAC CTCGTCAGCC TCGACGTGCC GGGCGCCGTC
GCCGGCCGCG CGATGATCTG CCGCCGCCTC GACATGTACC CGGTCGAGTG CGTGGCGCGC
GGCTACCTGG CCGGTTCGGG GCTCGCGGAG TACCGCGAGA CCGGCGCGGT GTGCGGGGTG
GAGCTGCCGC CAGGCCTGGT CGAGGGGTCG AAGCTCCCGA GGCCGATCTT CACGCCGGCC
ACCAAGGCCG ACCTCGGTGA GCACGACGAG AACGTCACGT TCGAGAAGGC GGCAGCGGAG
GTCGGTGAGG ACGTCGCGAC CCGGCTGCGT GACCTCACGC TCGAGCTCTA CACGCGCGCC
TCTCAGATCG CCGCTGGCCG GGGGATCATC CTCGCCGACA CGAAGTTCGA GTTCGGACGG
CGGCCCGGGA CTGACGAGAT CGTCCTCGGC GACGAGGTGC TGACGCCGGA CTCCTCGCGC
TACTGGCCCG CCGAGACCTG GCAGCCCGGT CGCCCGCAGC CCAGCTTCGA CAAGCAGTAC
GTGCGCGACT GGCTCGCCTC GCCGGCGTCC GGTTGGGACC GCACGGGCGG CGCGCTGCCG
CCCGAGCTGC CCGCCGACGT TGTCGAGAAG ACCCGCGCGC GCTACGTCGA GGCGTACGAG
CGGCTGACCG GGCGCGCCTT CTAG
 
Protein sequence
MSDAPPPAAP QVPGWRHVAS GKVRDLYVPD APPAGSLAVE PADAVVLLVA SDRISAYDYV 
LPTPIPDKGA ILTALSVWWF EQLADVVPNH LVSLDVPGAV AGRAMICRRL DMYPVECVAR
GYLAGSGLAE YRETGAVCGV ELPPGLVEGS KLPRPIFTPA TKADLGEHDE NVTFEKAAAE
VGEDVATRLR DLTLELYTRA SQIAAGRGII LADTKFEFGR RPGTDEIVLG DEVLTPDSSR
YWPAETWQPG RPQPSFDKQY VRDWLASPAS GWDRTGGALP PELPADVVEK TRARYVEAYE
RLTGRAF