Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3580 |
Symbol | |
ID | 7860844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3981094 |
End bp | 3982917 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643867683 |
Product | ABC transporter related |
Protein accession | YP_002883584 |
Protein GI | 229822058 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTCG TCATGGACGG CCTCGACGCG GAGCAGTACG ACCGCACGTA CGACGACCGC GACCTGCTGC GCCGCATCGT CGCCTACTTC CGACCCAAGC GCGGTCTCAT GGCGCTCGTC GCGTTCGGGA TCACGGCGCA GGCGCTCATG CAGGCCGCGA TGCCGGTGAT CATCAGCGCG GGGCTGGACC GGATCGTGAC CGATCGCTCG ACGGCGATCG TGGTGGCGCT GGTGACGGCG GTGGCCGTGA CGGGCGTCCT GGGGTGGGTC TTCAACTTCA TCCAGCGCTG GTACACCGCC AGGGTGGTCG GCGACGTCGT CCTCGACCTG CGCGAGGACG CGTTCGCGGC GGTGCTCGAG CGGGACATGT CGTTCTACGA CGAGAACCCG TCCGGCAAGG TCGTGAGCCG GGTGACGTCC GACACCGAGG ACTTCGCGAC AGTCGTCACG CTGACGCTCA ACGTCGTCAG CCAGGTCCTC ATGGTCGGCC TCGTGACGGC CCTGCTGTTC ACGCGCAACG TCACCCTCGC GCTGATGGTC ATGGGGGTCG TGCCCGTCGT CGTCGCCCTG GCGCTGGGCT TCCGGCGCAT CGCCCGCGAC ACCACGCGGC ACCAGCAGCG GTCGTTGGCC CGGGTCAACG CGACGCTGCA GGAGACCATG GGCGGGATCT CGGTGGCGAA GAACTTCCGC CAGGAGCAGA CGATCTACGA CGAGTTCCGG CCCATCAACG CGCAGAACTA CCGGGTGACG CTCAAGCAGG GGTTCGTGTT CGCGTCGATC TTCCCGGCGC TGTTCGCCGT CGCCGGTCTC GCGACGGTCA TGCTCGTGCA GGTCGGGGGC GGCCGGGCGC TCGACGGCGA CATCTCCGCC GGAGACTGGT ACCTGTTCCT GCAGAGCGTC GCCCTGTTCT GGATGCCGCT GACGTCGATC GCGTCGTTCT GGTCGCAGTT CCAGCAGGGC CTCTCGGCGT CGGAGCGGGT GTTCGCGCTC ATCGACGCCG AGCCGGCGGT CCGGCAGCAC GACACCCGGC CGGTCGAGCG GCTGGACGGC CGGATCGAGC TGCGCGACGT GTCGTTCGGC TACACGGCCG ACCACCTCGT GCTGCGCGAC TTCGACCTGA CGATCGAGGC GGGGGAGACC GTCGCGCTCG TCGGGCACAC AGGCGCCGGG AAGTCGACGA TCGGCCGGCT GCTCATGCGC TTCTACGAGT TCCAGGGCGG GCAGGTCCTC GTGGACGGGA TCGACCTGCG CACCGTCGAC CTCGCCGGCT ACCGCCACCA GCTCGGCGTC GTCCCGCAGA CGCCGTTCCT GTTCTCCGGG ACGGTGGCCG ACAACATCCG CTACCCGCGG CCCGACGCCT CCGACGACGA CGTGCGCGCG GCCGCCGGGC AGGTGGCGCG CGGCGACTGG ATCGCTGCCC TGCCGGACGG CCTGGACACG GAGGTCGGCG AGCACGGCTC TGCGTTGTCG ATGGGCCAGC GGCAGCTCGT CGCGCTGGCG CGTCTGCTGC TCCAGGACCC CTCGATCGTC ATCCTCGACG AGGCGACGGC GAGCGTCGAC CCGCTCACGG AGGCGCAGAT CTCGGAGGGC CTCGACGTCG TGCTCGCGGG TCGCACGTCG ATCGTGATCG CGCACCGGCT CTCCACCATC GAGCACGCCG ATCGCATCAT CGTCATGCGG TCCGGGGCCA TCGTCGAGGA GGGCACGCAC GCTGAGCTGC TCGCGTCCGG CGGGGCGTAC TGCGACGTGT ACAACACCTA CTTCCGGCAC CAGTCGCCCG ACTACCAGCC GGGGTCGGGC TTCGTCGAGG TCCGCGCGAC CTGA
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Protein sequence | MAFVMDGLDA EQYDRTYDDR DLLRRIVAYF RPKRGLMALV AFGITAQALM QAAMPVIISA GLDRIVTDRS TAIVVALVTA VAVTGVLGWV FNFIQRWYTA RVVGDVVLDL REDAFAAVLE RDMSFYDENP SGKVVSRVTS DTEDFATVVT LTLNVVSQVL MVGLVTALLF TRNVTLALMV MGVVPVVVAL ALGFRRIARD TTRHQQRSLA RVNATLQETM GGISVAKNFR QEQTIYDEFR PINAQNYRVT LKQGFVFASI FPALFAVAGL ATVMLVQVGG GRALDGDISA GDWYLFLQSV ALFWMPLTSI ASFWSQFQQG LSASERVFAL IDAEPAVRQH DTRPVERLDG RIELRDVSFG YTADHLVLRD FDLTIEAGET VALVGHTGAG KSTIGRLLMR FYEFQGGQVL VDGIDLRTVD LAGYRHQLGV VPQTPFLFSG TVADNIRYPR PDASDDDVRA AAGQVARGDW IAALPDGLDT EVGEHGSALS MGQRQLVALA RLLLQDPSIV ILDEATASVD PLTEAQISEG LDVVLAGRTS IVIAHRLSTI EHADRIIVMR SGAIVEEGTH AELLASGGAY CDVYNTYFRH QSPDYQPGSG FVEVRAT
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