Gene Bcav_3580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3580 
Symbol 
ID7860844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3981094 
End bp3982917 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content70% 
IMG OID643867683 
ProductABC transporter related 
Protein accessionYP_002883584 
Protein GI229822058 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTCG TCATGGACGG CCTCGACGCG GAGCAGTACG ACCGCACGTA CGACGACCGC 
GACCTGCTGC GCCGCATCGT CGCCTACTTC CGACCCAAGC GCGGTCTCAT GGCGCTCGTC
GCGTTCGGGA TCACGGCGCA GGCGCTCATG CAGGCCGCGA TGCCGGTGAT CATCAGCGCG
GGGCTGGACC GGATCGTGAC CGATCGCTCG ACGGCGATCG TGGTGGCGCT GGTGACGGCG
GTGGCCGTGA CGGGCGTCCT GGGGTGGGTC TTCAACTTCA TCCAGCGCTG GTACACCGCC
AGGGTGGTCG GCGACGTCGT CCTCGACCTG CGCGAGGACG CGTTCGCGGC GGTGCTCGAG
CGGGACATGT CGTTCTACGA CGAGAACCCG TCCGGCAAGG TCGTGAGCCG GGTGACGTCC
GACACCGAGG ACTTCGCGAC AGTCGTCACG CTGACGCTCA ACGTCGTCAG CCAGGTCCTC
ATGGTCGGCC TCGTGACGGC CCTGCTGTTC ACGCGCAACG TCACCCTCGC GCTGATGGTC
ATGGGGGTCG TGCCCGTCGT CGTCGCCCTG GCGCTGGGCT TCCGGCGCAT CGCCCGCGAC
ACCACGCGGC ACCAGCAGCG GTCGTTGGCC CGGGTCAACG CGACGCTGCA GGAGACCATG
GGCGGGATCT CGGTGGCGAA GAACTTCCGC CAGGAGCAGA CGATCTACGA CGAGTTCCGG
CCCATCAACG CGCAGAACTA CCGGGTGACG CTCAAGCAGG GGTTCGTGTT CGCGTCGATC
TTCCCGGCGC TGTTCGCCGT CGCCGGTCTC GCGACGGTCA TGCTCGTGCA GGTCGGGGGC
GGCCGGGCGC TCGACGGCGA CATCTCCGCC GGAGACTGGT ACCTGTTCCT GCAGAGCGTC
GCCCTGTTCT GGATGCCGCT GACGTCGATC GCGTCGTTCT GGTCGCAGTT CCAGCAGGGC
CTCTCGGCGT CGGAGCGGGT GTTCGCGCTC ATCGACGCCG AGCCGGCGGT CCGGCAGCAC
GACACCCGGC CGGTCGAGCG GCTGGACGGC CGGATCGAGC TGCGCGACGT GTCGTTCGGC
TACACGGCCG ACCACCTCGT GCTGCGCGAC TTCGACCTGA CGATCGAGGC GGGGGAGACC
GTCGCGCTCG TCGGGCACAC AGGCGCCGGG AAGTCGACGA TCGGCCGGCT GCTCATGCGC
TTCTACGAGT TCCAGGGCGG GCAGGTCCTC GTGGACGGGA TCGACCTGCG CACCGTCGAC
CTCGCCGGCT ACCGCCACCA GCTCGGCGTC GTCCCGCAGA CGCCGTTCCT GTTCTCCGGG
ACGGTGGCCG ACAACATCCG CTACCCGCGG CCCGACGCCT CCGACGACGA CGTGCGCGCG
GCCGCCGGGC AGGTGGCGCG CGGCGACTGG ATCGCTGCCC TGCCGGACGG CCTGGACACG
GAGGTCGGCG AGCACGGCTC TGCGTTGTCG ATGGGCCAGC GGCAGCTCGT CGCGCTGGCG
CGTCTGCTGC TCCAGGACCC CTCGATCGTC ATCCTCGACG AGGCGACGGC GAGCGTCGAC
CCGCTCACGG AGGCGCAGAT CTCGGAGGGC CTCGACGTCG TGCTCGCGGG TCGCACGTCG
ATCGTGATCG CGCACCGGCT CTCCACCATC GAGCACGCCG ATCGCATCAT CGTCATGCGG
TCCGGGGCCA TCGTCGAGGA GGGCACGCAC GCTGAGCTGC TCGCGTCCGG CGGGGCGTAC
TGCGACGTGT ACAACACCTA CTTCCGGCAC CAGTCGCCCG ACTACCAGCC GGGGTCGGGC
TTCGTCGAGG TCCGCGCGAC CTGA
 
Protein sequence
MAFVMDGLDA EQYDRTYDDR DLLRRIVAYF RPKRGLMALV AFGITAQALM QAAMPVIISA 
GLDRIVTDRS TAIVVALVTA VAVTGVLGWV FNFIQRWYTA RVVGDVVLDL REDAFAAVLE
RDMSFYDENP SGKVVSRVTS DTEDFATVVT LTLNVVSQVL MVGLVTALLF TRNVTLALMV
MGVVPVVVAL ALGFRRIARD TTRHQQRSLA RVNATLQETM GGISVAKNFR QEQTIYDEFR
PINAQNYRVT LKQGFVFASI FPALFAVAGL ATVMLVQVGG GRALDGDISA GDWYLFLQSV
ALFWMPLTSI ASFWSQFQQG LSASERVFAL IDAEPAVRQH DTRPVERLDG RIELRDVSFG
YTADHLVLRD FDLTIEAGET VALVGHTGAG KSTIGRLLMR FYEFQGGQVL VDGIDLRTVD
LAGYRHQLGV VPQTPFLFSG TVADNIRYPR PDASDDDVRA AAGQVARGDW IAALPDGLDT
EVGEHGSALS MGQRQLVALA RLLLQDPSIV ILDEATASVD PLTEAQISEG LDVVLAGRTS
IVIAHRLSTI EHADRIIVMR SGAIVEEGTH AELLASGGAY CDVYNTYFRH QSPDYQPGSG
FVEVRAT