Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3565 |
Symbol | sdhA |
ID | 7860829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3959644 |
End bp | 3961578 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643867668 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_002883569 |
Protein GI | 229822043 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.606678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCGAGA CCGAACGACA CGACTACGAC GTCCTCGTCA TCGGGGCTGG TGGTGCGGGC CTGCGGGCCG CGATCGAGGC ACGCCAGCGT GGCCTGCGGA CGGCCGTCAT CTGCAAGTCC CTGTTCGGCA AGGCGCACAC CGTCATGGCG GAGGGCGGCT GCGCGGCGGC GATGGGGAAC GTCAACTCGA ACGACAGCTG GCAGGTGCAC TTCCGCGACA CGATGCGCGG CGGGAAGTTC CTCAACAACT GGCGCATGGC GGAGCTGCAC GCGAAGGAGG CACCCGAGCG CGTCTGGGAG CTCGAGACGT ACGGGGCGCT GTTCGACCGC ACGGCCGACG GCCGGATCAG TCAGCGCAAC TTCGGCGGGC ACACGTACCC GCGGCTCGCG CACGTCGGCG ACCGCACCGG CCTCGAGCTC ATCCGCACGA TGCAGCAGAA GATCGTGTCG CTGCAGCAGG AGGACTACGC GGCCACCGGC GACTACGAGG CGCGGCTGCG CGTGTTCGCG GAGTGCACCA TCACCGAGCT GCTCACCGGC GACGACGGCG CGATCGCCGG GGCGTTCGGG TACTGGCGGG AGTCCGGCCG ATTCGTCGTG TTCTCCGCGC CGGCCGTGGT GCTCGCGACG GGCGGCATCG GGAAGTCGTT CAAGGTGACG TCGAACTCGT GGGAGTACAC GGGCGACGGG CACGCCCTGG CGATGCGCGC CGGAGCCGGG CTCATCGACA TGGAGTTCGT GCAGTTCCAC CCCACGGGCA TGGTGTGGCC GCCGAGCGTG AAGGGGATCC TCGTCACCGA AGGCGTGCGC GGCGACGGCG GCGTGCTCAA GAACTCTGCC GGCGAGCGGT TCATGTTCAA CTACGTCCCG GACGTGTTCA AGGGTCAGTA CGCGGAGACC GTGGAGGAGG CGGACGCCTG GTACACCGAC CAGGAGAACA ACCGCCGGAC GCCGGACCTC CTGCCGCGCG ACGAGGTGGC ACGGGCGATC AACACCGAGG TCAAGGAGGG TCGCGGCTCG CCGCACGGCG GCGTGTTCCT CGACATCGCG AGCCGGATGC CGGCGGACGA GATCCAGCGC CGGCTGCCGT CGATGTACCA CCAGTTCAAG GAGCTGGCCG ACGTCGACAT CACCGCCGAG CCCATGGAGG TCGGCCCCAC GTGCCACTAC GTCATGGGCG GCATCGAGGT GGACCCGGAC ACGGGGTCCT CGAGCGTGCC CGGGCTGTTC GCGGCAGGGG AGTGCTCCGG CGGGATGCAC GGCTCGAACC GGCTGGGCGG CAACTCGCTC TCGGACCTGC TCGTGTTCGG GCGGCGTGCC GGGCTCGGCG CCGCCGACTA CGTCTCCGGC CTCGAGTCAC GTCCGGCCGT GCGCGCCGCC GCCGTCGACG ACGCCGCGGC CATGGCCGTC GCGCCCTTCG ACCCCGCGGC CGACGGGGGT TCCGGGGAGA ACCCGTACAC GCTGCACGCC GAGCTGCAGA CGGCGATGAA CGACCTCGTC GGCATCATCC GGACCGAGGC CGAGATGCAG GCGGCGCTGG AGCGGCTCGG CGAGCTGCGG GAGCGCGTGC GCGGCGTCGT CGTCGAGGGA CACCGGCAGT ACAACCCGGG ATGGCACCTG GCGCTCGACC TGCGGAACAT GCTCATGGTG GGGGAGGCGG TCGCGTCGTC GGCCCTGCTG CGCACGGAGA GCCGCGGCGG CCACACGCGA GAGGACCACC CGGGGATGGA CGCGCAGTGG CGGCACCGGG TGCTCGTCAC GCGGTGCGCC GACCACGGCG GCGGCGACCC GGTGGTGCCG CGCGTCGTCG TCGAGCCGGA GGAGCGGGCG CCGATGCGCG ACGACCTGCT CGCGCTCTTC GACCTCACCG AGCTCGAGAA GTACTACACC GGGGGCGAGC TGGCCTCGCA CCCGGAGCAG GGAGCGAGCG CATGA
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Protein sequence | MTETERHDYD VLVIGAGGAG LRAAIEARQR GLRTAVICKS LFGKAHTVMA EGGCAAAMGN VNSNDSWQVH FRDTMRGGKF LNNWRMAELH AKEAPERVWE LETYGALFDR TADGRISQRN FGGHTYPRLA HVGDRTGLEL IRTMQQKIVS LQQEDYAATG DYEARLRVFA ECTITELLTG DDGAIAGAFG YWRESGRFVV FSAPAVVLAT GGIGKSFKVT SNSWEYTGDG HALAMRAGAG LIDMEFVQFH PTGMVWPPSV KGILVTEGVR GDGGVLKNSA GERFMFNYVP DVFKGQYAET VEEADAWYTD QENNRRTPDL LPRDEVARAI NTEVKEGRGS PHGGVFLDIA SRMPADEIQR RLPSMYHQFK ELADVDITAE PMEVGPTCHY VMGGIEVDPD TGSSSVPGLF AAGECSGGMH GSNRLGGNSL SDLLVFGRRA GLGAADYVSG LESRPAVRAA AVDDAAAMAV APFDPAADGG SGENPYTLHA ELQTAMNDLV GIIRTEAEMQ AALERLGELR ERVRGVVVEG HRQYNPGWHL ALDLRNMLMV GEAVASSALL RTESRGGHTR EDHPGMDAQW RHRVLVTRCA DHGGGDPVVP RVVVEPEERA PMRDDLLALF DLTELEKYYT GGELASHPEQ GASA
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