Gene Bcav_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3560 
Symbol 
ID7860824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3954092 
End bp3954970 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content74% 
IMG OID643867663 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_002883564 
Protein GI229822038 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01505] 2-hydroxy-3-oxopropionate reductase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.737632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA TCGGGTTCAT CGGAGCGGGC GTCATGGGCG CGCCCATGAT CGCCAACCTC 
GTCTCGGCCG GGCACTCGGT CCGCGGGTTC GCGAGATCAG CGGCGTCGCG CGAGCGGATC
GCCGCGGCCG GCGCCGCCGT GGCGACGGCC GCTGACGACT GCCTCGAGAG CGACGTGCTC
ATCTCGATGC TCCCCGACTC GCCCGACGTC GCCGCCGTCT ACCTCGGCGA GCGGGGCCTC
GCCCGGTCGG TGTCACCGCA GCAGATCGTC GTCGACATGA GCACCGTCAC CGCCGAGACC
GCGATCGCCG TGCACGACGC CGTGGGTGCC GCCGGCGGCT CGGCGCTCGA CGCTCCGGTG
AGCGGCGGCG AGCAGGCCGC CGTCGAGGGT TCGCTCAGCA TCATGGTGGG CGGCGAGCCG
GACGTGATCG AGCGCGTCCG CCCGCTCCTG GAGGCGATGG GCTCCGCGAT CACGCACGTC
GGACCCCCTG GTTCGGGGCA GCTCACGAAG GCCGCCAACC AGCTCATCGT CGCCACGAAC
ATCGCCGCCC TCGCCGAGGC GGTGGTGCTC CTCGAGTCGT CGGGGATCGA CGTCGGCGCC
GCACTCACGG CCATCGGCGG CGGGCTCGCC GGGTCCACGG TGCTCGAGCG GAAGCGGGCC
GCGATCCTCG CCGGCACGTA CCGACCAGGG TTCCGCGCGG CGCTGCACGA CAAGGACCTC
GGCATCGTCG CCGCGGCCGC TCGCCGCGAG GGGATCGCGC TGCCCGTCAC GGCGGTGGTG
TCCCAGCTCA TGGCCGCGCT CCTCGCCCGC GGCGACGGCG AGCTGGACCA CCTCGCGCTC
CTCAAGCTCG CGCGCGAGCT GAACGGCCGG GCGGGCTGA
 
Protein sequence
MTNIGFIGAG VMGAPMIANL VSAGHSVRGF ARSAASRERI AAAGAAVATA ADDCLESDVL 
ISMLPDSPDV AAVYLGERGL ARSVSPQQIV VDMSTVTAET AIAVHDAVGA AGGSALDAPV
SGGEQAAVEG SLSIMVGGEP DVIERVRPLL EAMGSAITHV GPPGSGQLTK AANQLIVATN
IAALAEAVVL LESSGIDVGA ALTAIGGGLA GSTVLERKRA AILAGTYRPG FRAALHDKDL
GIVAAAARRE GIALPVTAVV SQLMAALLAR GDGELDHLAL LKLARELNGR AG