Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3527 |
Symbol | |
ID | 7858422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3920285 |
End bp | 3921283 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643867630 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002883531 |
Protein GI | 229822005 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.291445 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGAGTC CGGTCGAGCA CGCTCGGTCA GGGGACGGCG CGGACGCGGA GGGCGCCTCC GTCCGCCAGG AGGACGTCGC CGTCTTCGAG GCCTCGCGGG ACCGCCTCGA GGCGATCGCG TACCGGCTCC TGGGCTCCGC CGTCGAGGCC GAGGACGCCG TCCAGGAGAC GTTCCTGCGC TGGGAGCGTG CCGACCGGAA CCAGGTCCGG GTGCCGGAGG CGTGGTTGAC CCGGGTCCTG ACGAACCTGT GCCTCACCCA GCTGACGTCC GCGCGGGCCC GGCGGGAGGT CTACGTGGGT GAGTGGCTCC CTGAGCCCGT GCTCGACGGC GACCCGATGC TGGGGCCCGC CGACACGGCC GAGCAGCGCG ACTCCGTGTC GACGGCCGTG CTGATGCTGC TCGAGCGGCT GACGCCTCCG GAACGCGCCG TGTACGTGCT CAGGGAGGCA TTCGCGTACC CCCACGCCGA GATCGCCGAG CTCCTCGGCA TCAGCGAGGC GGCGAGCCAG CAGCTGCTGC ACCGCGCGAA GCAGCGGGTG GCCACCGGGA GGTCCCGCGT GCAGGTCGAC TCCGCGACGG CGCGGGAGGT CGTGGAGGAG TTCCTCCTCG CGGCGATGAG CGGGCAGACC GAGCCGCTCG TGCGGCTCCT CACCGACGAC GCGATGGGGG TGGGCGACGG CGGTGGCCGG GTCCCGGCGC GGGGGACGCC GTTCGTCGGC GCGGTCACAG TCGCGCGGTT CCTGCGCGGG CTGTTCCGCC CGGCGGACTC CAAGCGCGCC TTCTTCGACG GGCGGCTCGA CCTGTACGCC TCGACGGCCA ACGGCAGCCC CGCGGTCGTG GCGGTGGCGG GCGGCCGCCT GATCGGCGTC ATGAGCCTCG AGGTCACGGA CACGGGGATC GCCTCGGTGC TGAGCCAGGT CAACCCGGAC AAGCTCGGTC GCTTCGCCCG CGCGTGGGCC GAGTCGGACC ACGGCGATCC GGTGCTCGTC GGCTGGTGA
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Protein sequence | MGSPVEHARS GDGADAEGAS VRQEDVAVFE ASRDRLEAIA YRLLGSAVEA EDAVQETFLR WERADRNQVR VPEAWLTRVL TNLCLTQLTS ARARREVYVG EWLPEPVLDG DPMLGPADTA EQRDSVSTAV LMLLERLTPP ERAVYVLREA FAYPHAEIAE LLGISEAASQ QLLHRAKQRV ATGRSRVQVD SATAREVVEE FLLAAMSGQT EPLVRLLTDD AMGVGDGGGR VPARGTPFVG AVTVARFLRG LFRPADSKRA FFDGRLDLYA STANGSPAVV AVAGGRLIGV MSLEVTDTGI ASVLSQVNPD KLGRFARAWA ESDHGDPVLV GW
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