| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3527 |
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| Symbol | |
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| ID | 7858422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3920285 |
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| End bp | 3921283 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643867630 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002883531 |
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| Protein GI | 229822005 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.291445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAGTC CGGTCGAGCA CGCTCGGTCA GGGGACGGCG CGGACGCGGA GGGCGCCTCC
GTCCGCCAGG AGGACGTCGC CGTCTTCGAG GCCTCGCGGG ACCGCCTCGA GGCGATCGCG
TACCGGCTCC TGGGCTCCGC CGTCGAGGCC GAGGACGCCG TCCAGGAGAC GTTCCTGCGC
TGGGAGCGTG CCGACCGGAA CCAGGTCCGG GTGCCGGAGG CGTGGTTGAC CCGGGTCCTG
ACGAACCTGT GCCTCACCCA GCTGACGTCC GCGCGGGCCC GGCGGGAGGT CTACGTGGGT
GAGTGGCTCC CTGAGCCCGT GCTCGACGGC GACCCGATGC TGGGGCCCGC CGACACGGCC
GAGCAGCGCG ACTCCGTGTC GACGGCCGTG CTGATGCTGC TCGAGCGGCT GACGCCTCCG
GAACGCGCCG TGTACGTGCT CAGGGAGGCA TTCGCGTACC CCCACGCCGA GATCGCCGAG
CTCCTCGGCA TCAGCGAGGC GGCGAGCCAG CAGCTGCTGC ACCGCGCGAA GCAGCGGGTG
GCCACCGGGA GGTCCCGCGT GCAGGTCGAC TCCGCGACGG CGCGGGAGGT CGTGGAGGAG
TTCCTCCTCG CGGCGATGAG CGGGCAGACC GAGCCGCTCG TGCGGCTCCT CACCGACGAC
GCGATGGGGG TGGGCGACGG CGGTGGCCGG GTCCCGGCGC GGGGGACGCC GTTCGTCGGC
GCGGTCACAG TCGCGCGGTT CCTGCGCGGG CTGTTCCGCC CGGCGGACTC CAAGCGCGCC
TTCTTCGACG GGCGGCTCGA CCTGTACGCC TCGACGGCCA ACGGCAGCCC CGCGGTCGTG
GCGGTGGCGG GCGGCCGCCT GATCGGCGTC ATGAGCCTCG AGGTCACGGA CACGGGGATC
GCCTCGGTGC TGAGCCAGGT CAACCCGGAC AAGCTCGGTC GCTTCGCCCG CGCGTGGGCC
GAGTCGGACC ACGGCGATCC GGTGCTCGTC GGCTGGTGA
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| Protein sequence | MGSPVEHARS GDGADAEGAS VRQEDVAVFE ASRDRLEAIA YRLLGSAVEA EDAVQETFLR
WERADRNQVR VPEAWLTRVL TNLCLTQLTS ARARREVYVG EWLPEPVLDG DPMLGPADTA
EQRDSVSTAV LMLLERLTPP ERAVYVLREA FAYPHAEIAE LLGISEAASQ QLLHRAKQRV
ATGRSRVQVD SATAREVVEE FLLAAMSGQT EPLVRLLTDD AMGVGDGGGR VPARGTPFVG
AVTVARFLRG LFRPADSKRA FFDGRLDLYA STANGSPAVV AVAGGRLIGV MSLEVTDTGI
ASVLSQVNPD KLGRFARAWA ESDHGDPVLV GW
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