Gene Bcav_3526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3526 
Symbol 
ID7858421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3918961 
End bp3920172 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content75% 
IMG OID643867629 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002883530 
Protein GI229822004 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.22367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACC GCATCGTCAT CCTGGGAGCC GGGTACGCCG GCGCGTCCGC CGTCGGACGT 
CTCGCGGCGC GCCTGCACCC CGACGACGTC GAGATCACCC TGGTCAACGC GGAGCCCGAC
TTCGTCGAGC GGATCCGGAT GCACCAGGTG GCCGCCGGGC AGGAGCTGCG CCGCCGCGCG
CTGGCCGACG CGCTCGCCGG CACGGGTGTG ACGCTGCGAG TCGCTCGCGT CGCCGCCGTC
GACGCCGATG CCCGCGCCGT CATGCTCACC GGGCCCGACG GTGCGAGCGG CGCCGACAGG
CTCGGCTACG ACACGCTCGT CTACGCCCTG GGCAGCTCGG TGGCGCGGCA CGGTGTCCCA
GGCGTCGCCG AGCACGCGTA CGACGTCGCG AGCCGGCCCG GTGCGATCCG GCTGCGCGAC
CGGCTGGCCG CACTCGGACG CGGTGGGCGT GTGGTGGTGG TCGGCGGCGG CCTCACCGGC
ATCGAGGCGG CCAGCGAGAT CGCCGAGGCA CGGCCCGAGC TGGACGTCGC CCTCCTCGTC
CGCGGTGGCC TCGGCGACTG GCTCTCGCCG GCCGGCCAGC GGCACCTGCG GGCCACGTTC
TCCAGGCTCG GTGTCACGGT CCACGAACGC ACCGCTGTCA CGGGCGTCGA CGGGGACGAG
GTGACGACCG ACGGCGGAGC GCGCGTGCGC AGCGACGTCA CCGTGTGGAC GGGCGGGTTC
GTGACCCACC CGATCGCGGC CGCCTCGTCC CTGACGGTCG GCGGCGACGG GCGAATCGTC
GTCGACCGGA CCATGAGGTC CCTCTCGCAC CCCGACGTGT ACGCCGTCGG CGACTCCGCC
CGTGCCCCAG GGCCCCGGGG GACGACGCTG CGCATGTCGT GCGCGTCGGG CGTCCCGATG
GGCTGGCAGG CCGCCGACTC CATCGTGGCG CGCCTGACCG GCGGCCGGCT CCCGCACATG
CCGCTGGGCT ATGTCCAGCA GTGCATCAGC CTCGGGCGGC GCGACGGGCT GATCCAGTTC
GTCACGTTCG ACGACCGAGC CAGGTCCGCC GCGTTCGGTG GGCGCCTCGC CGCCCGGTAC
AAGGAGCTCA TCTGCCGGGG CGCCGCTCTC GCGTTGCCCG CGTCGCGCAC CGCGCTGCCG
TACCCGGCTC GACGGCGTCG CGTCGGCTCG CAGGGCACGT CGGTCCGTCC GCCGGTCGGC
GTCGCGGGGT AG
 
Protein sequence
MKHRIVILGA GYAGASAVGR LAARLHPDDV EITLVNAEPD FVERIRMHQV AAGQELRRRA 
LADALAGTGV TLRVARVAAV DADARAVMLT GPDGASGADR LGYDTLVYAL GSSVARHGVP
GVAEHAYDVA SRPGAIRLRD RLAALGRGGR VVVVGGGLTG IEAASEIAEA RPELDVALLV
RGGLGDWLSP AGQRHLRATF SRLGVTVHER TAVTGVDGDE VTTDGGARVR SDVTVWTGGF
VTHPIAAASS LTVGGDGRIV VDRTMRSLSH PDVYAVGDSA RAPGPRGTTL RMSCASGVPM
GWQAADSIVA RLTGGRLPHM PLGYVQQCIS LGRRDGLIQF VTFDDRARSA AFGGRLAARY
KELICRGAAL ALPASRTALP YPARRRRVGS QGTSVRPPVG VAG