Gene Bcav_3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3482 
Symbol 
ID7858374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3874420 
End bp3875811 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content75% 
IMG OID643867582 
Productprotein of unknown function DUF1212 
Protein accessionYP_002883486 
Protein GI229821960 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGG ACGACGACGG CGTGCCGCCC CCCGTCGAGC AGCCTCACCG CATCTCGATC 
GTGGGGCGCC TCCGGCGCGC GATCGAGGCG CTCAACGAGG ACACCGGGTC CCTGACTCCC
GTCGCCGACA CGTTCCACGG CGACCCGCAG CTCGTCCCGC TCCTGCGCGA CGTCGGCGAG
GCCGAGCTGC GCGCGGGACG CTCGGTGATG GACACGGCTG ACGTCGTCGA GGACGTGGCG
CGCGCCTACG GCGTCGCGTC GGTGCGCACG ATCGTGCTCC CGACGGCGAT CTTCGTCCGC
GTCCAGCAGC GCACCGACTC GCAGGTGGAG ATCGACCTCG GGAGCCCCAG CGGCGACACG
CTGAGCCTGC GCCAGGTGGG CGACGTCCAC GCGCTCGAGG ACCGCCTGCG CCGCGCCGAG
GTCTCGCCCG CGGAGGGACG GACCCTGCTC GCCGCGATCC TGGCGCAGCC GCCGTCGCTC
GGCGCCGGCT CGCTCGTGCT CGGGCACGCG ACGCTCGCGC TCGGGTTCGC CCTCATCCTC
AACCCCACGC TGAGCGTGCT GCCCGTGACG GCGCTGCTCG GCGCCGTCAT CGGTCTCCTC
CGGGTGGTCG CGAGCCGCTG GTCCTCCCTG AGCACCGGCC TGCCCGTCCT CGCGACGTTC
GTCGTGACGC TCATGGGCGT CACGTGGTTC GCGCCGTGGC TCGGCGTCGA CCCCGTGCTC
GTCATCGCGC CGCCGGTGGT CAGCTTCCTG CCGGGAGCCC TGCTCACGAT CGCGGCGATG
GAGCTCACGA GCGGTCAGGT CGTCGCGGGC ACGAGCCGGC TGGGACACGG GCTGGCGCAG
CTGCTGCTGC TCGCGTTCGG CGTCGTCGCG GGCGTGACGA TCGCCGGCCC GCTGCCGCAG
GGCACGTCCG ACACGACGCT CGGCACGTGG GCGCCGTTCG TCGGGATCGC CGTCGTCAGC
ATCGGCTACT TCTTCTACGC CGCGCCGTCG CCGCGCGCCC TCCCGTGGAT CTTCGTGCTG
CTCGTGGCCG TCTACGGCGC GCAGCTCCTC GGCGCCACGG TCCTCGCCGG ACCGCTGTCC
GGGTTCGTCG GTGGGCTGGT CGTCGCCCCG CTCTCCGAGC TGATCGCCCG CCGCCCGTCC
GGGCCGCCCG CCGTCGTCAC GAGCCTGCCG GCGTTCTGGC TGCTGGTGCC CGGCGCTCTC
AGCTTCGTCG GCGTCTCCGA GCTCGCCGGC GGGAACGCGG CGGGCGTCGA GGACGCGGTG
CAGGCGGTGA TCGCCCTCTT CTCGATCGCG CTCGGTGTGC TCTTCGGCAC GGCGCTCGCC
CGTGACGCCC GGCGGGTCAC CCGGTCCATC GCCGCCGCCG CCCGCGACAG CGGCGCGCCG
GGCGGGCGGT GA
 
Protein sequence
MSGDDDGVPP PVEQPHRISI VGRLRRAIEA LNEDTGSLTP VADTFHGDPQ LVPLLRDVGE 
AELRAGRSVM DTADVVEDVA RAYGVASVRT IVLPTAIFVR VQQRTDSQVE IDLGSPSGDT
LSLRQVGDVH ALEDRLRRAE VSPAEGRTLL AAILAQPPSL GAGSLVLGHA TLALGFALIL
NPTLSVLPVT ALLGAVIGLL RVVASRWSSL STGLPVLATF VVTLMGVTWF APWLGVDPVL
VIAPPVVSFL PGALLTIAAM ELTSGQVVAG TSRLGHGLAQ LLLLAFGVVA GVTIAGPLPQ
GTSDTTLGTW APFVGIAVVS IGYFFYAAPS PRALPWIFVL LVAVYGAQLL GATVLAGPLS
GFVGGLVVAP LSELIARRPS GPPAVVTSLP AFWLLVPGAL SFVGVSELAG GNAAGVEDAV
QAVIALFSIA LGVLFGTALA RDARRVTRSI AAAARDSGAP GGR