Gene Bcav_3448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3448 
Symbol 
ID7859222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3849421 
End bp3850452 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content74% 
IMG OID643867548 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002883452 
Protein GI229821926 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.510387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGACT ACCGTACGCC CGCCGTCGTG GCACCCGAGG CGCCGTCGAC CCCCGGCGCG 
GAGCAGGCAC CCCTGCTCCG CGTCGAGGGC CTCACGGTGG TCCTGTCCTC GGGTGCCACG
CGAGGGGTCG TCCTCGACTC GGTGTCCTTC TCCGTGGGAG CCGGGCGCAC CACCGGGCTG
ATCGGCGAGT CCGGCAGCGG CAAGACGATG AGCGCGATGG CGATCGTCCG GCTGCTCCCG
GAGGGCGCCG AGACGTCCGG CCGGGTGATC TGGGGGACGC AGGACCTGCT CGAGGCGCCC
GCGCGCCGGA TGCGCGAGGT CAGGGGCCAC GAGATCGGCG TGATCTTCCA GGACCCGCTC
TCGGCGCTCA ACCCGCTCCA GACGGTGGGC AAGCAGATCG GCGAGACCCT GCGGCGGGGC
GGCATGCCGC GGGCCCAGGT GCGGGCCAGG GTGCTCGAGC TCCTCGACCG GGTCGGCATC
CCCGACCCGG AGCAGCGGAT CGGCGTCTAC CCGCACGAGA TGTCCGGGGG CATGCGCCAA
CGGGTGATGA TCGCGACGGC GCTGGCCGGA TCTCCGCGGC TGATCATCGC GGACGAGCCG
ACGACGGCGC TGGACGTCAC CACGCAGGCC CGGATCCTGC GGCTGCTCGC CGACCTGCGC
GACAGCGACG GCGTCGCGAT GCTCCTGGTG AGCCACGACC TGCGCGTCAT GGCCCACGTG
GCCGACGACG TCGTCGTCAT GTACGCGGGC CGCGTGGCCG AGCGCGGGCG CGCCGACGCC
GTGCTCGCGC GGCCGCGCCA CCCGTACACC CGGGCGCTGG CGAACAACGT CCCGGCCGTC
ACCACGAAGT CAGCGATCGC GGAGCCCCTG CGCGGCGCCC CCGCCAACCC GTTCGACCGG
CCACCCGGCT GCGCGTTCCA CCCGCGGTGC CCGCTGGCGC AGGCGGTGTG CCGCACGACG
ACGCCGGAGC TGCGCGAGGT CGAGCCGGGC CGCTTCAGCG CCTGCCACTT CGCCGAGGAG
GTCGGCTCAT GA
 
Protein sequence
MTDYRTPAVV APEAPSTPGA EQAPLLRVEG LTVVLSSGAT RGVVLDSVSF SVGAGRTTGL 
IGESGSGKTM SAMAIVRLLP EGAETSGRVI WGTQDLLEAP ARRMREVRGH EIGVIFQDPL
SALNPLQTVG KQIGETLRRG GMPRAQVRAR VLELLDRVGI PDPEQRIGVY PHEMSGGMRQ
RVMIATALAG SPRLIIADEP TTALDVTTQA RILRLLADLR DSDGVAMLLV SHDLRVMAHV
ADDVVVMYAG RVAERGRADA VLARPRHPYT RALANNVPAV TTKSAIAEPL RGAPANPFDR
PPGCAFHPRC PLAQAVCRTT TPELREVEPG RFSACHFAEE VGS