| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3447 |
|---|
| Symbol | |
|---|
| ID | 7859221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3848576 |
|---|
| End bp | 3849424 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643867547 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002883451 |
|---|
| Protein GI | 229821925 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.491828 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGG CGCCGGGCGG GGCGAGCCTA CTGGAGATCC GCGACCTGGA CGTCACGTTC
ACGGGTCCGC GACGGTCGCT GCGGACGCCT CCCACGGTGG TCCGCGCCGT CGACGGCGTG
AGCCTGGACG TGCGCGCCGG CGAGACCCTC GCGCTCGTCG GCGAGTCCGG ATCCGGGAAG
TCCACCGTCG CTCGCTGCGT GCTGGGTCTC GTCCGCCCGC AGGCGGGGAC CATCCGGTAC
GACGGACGCG AGCTCGGCCC CGTGGACAAG CGCCCCCCGG AGCTGCAGCG CGCGGTGCAG
ATGGTGTTCC AGGACCCCGG CTCGTCGCTG AACCCGCGCA TGAGCGTCGG GGCGATCATC
CGGGAGGCGT GGCAGGTGCA TCCCGCCGTC GCCCCGGCCG GCGACCGTCG GGAGGCGCTG
GCCGCGGTGC TGACCGACGT CGGCCTCGAC CCGGGCGTCG CGGAACGCCG GCCCTCGGCG
CTGTCCGGCG GGCAGCGGCA GCGCGTGAGC ATCGCCCGGG CGCTCGCCCT GCGGCCCCGG
CTGCTGGTCT GCGACGAGGC CGTGTCGGCG CTCGACGTCT CGGTCCAGGC GCAGATCCTC
CGCCTGCTCA TCGACCTCCA GGCGAGCCAC GACCTGACGG TGCTCTTCAT CACCCACGAC
CTCGCCGTCG TGCGGCAGAT CGCCGACCGC GTCGCCGTCA TGAGGAAGGG CGAGCTCGTG
GAGCTCGCAC CGGCCGGCGA GCTCTTCACC TCGCCGTCCC ACCCGTACAC GAAGGGCCTG
CTGGCCGCCG CCTACGACCT GGAGGGCGTC GAGGCGCCGT TCCGGGAAAC CCAGGAGCAG
ATGAGTTGA
|
|---|
| Protein sequence | MTTAPGGASL LEIRDLDVTF TGPRRSLRTP PTVVRAVDGV SLDVRAGETL ALVGESGSGK
STVARCVLGL VRPQAGTIRY DGRELGPVDK RPPELQRAVQ MVFQDPGSSL NPRMSVGAII
REAWQVHPAV APAGDRREAL AAVLTDVGLD PGVAERRPSA LSGGQRQRVS IARALALRPR
LLVCDEAVSA LDVSVQAQIL RLLIDLQASH DLTVLFITHD LAVVRQIADR VAVMRKGELV
ELAPAGELFT SPSHPYTKGL LAAAYDLEGV EAPFRETQEQ MS
|
|---|
| |