Gene Bcav_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3409 
Symbol 
ID7859182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3811776 
End bp3812201 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content75% 
IMG OID643867508 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_002883413 
Protein GI229821887 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGTCG TGCTGCAGCG GGTCTCGCGG GCCCGGGTCC TCGTGGACGG GCAGGTCGTG 
GGCGAGGTGA GCGGCGAGGG ACTCGTCGCC TTCGTGGGCG TGACGCCGGG CGACGGCGCG
GGCGAGGTGG CGCTCCTCGC GCGCAAGATC GCGGAGCTGC GCGTCCTCCG CGACGAGCGG
TCGGTGCTCG ACGCCGGTGC GGGCGTGCTC GTCGTCAGCC AGTTCACGTT GTACGCCGAC
ACCCGCAAGG GCCGTCGGCC GACGTGGAGC GCCGCGGCGC CCCGGCCGGT GGCCGAGCCG
GTGGTGGACG CCCTGGTGGA GGCGCTCCGG GAACGGGGAG TCGTCGTCGC GACCGGCGTG
TTCGGCGCGG ACATGGCCGT CGAGCTCACG AACGACGGGC CGGTGACGAT CCTCCTCGAG
GCCTGA
 
Protein sequence
MRVVLQRVSR ARVLVDGQVV GEVSGEGLVA FVGVTPGDGA GEVALLARKI AELRVLRDER 
SVLDAGAGVL VVSQFTLYAD TRKGRRPTWS AAAPRPVAEP VVDALVEALR ERGVVVATGV
FGADMAVELT NDGPVTILLE A