Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3408 |
Symbol | |
ID | 7859181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3810070 |
End bp | 3811644 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 80% |
IMG OID | 643867507 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002883412 |
Protein GI | 229821886 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGTCG CCACCACGGC CGACGGTGCC GCGCCGGCGT CGATGCGACC GGGCGCCGTC GTCGTCGGAC GCCGCCCCGC GGGACGGGCC GCCGGTCGCG GTGCCGCGCC CGCCGCCCCG CGGCCGTGGG CGGCGCTCGC GGTGCTCGTC CTGCCCGTGC TCGCCGTCAG CCTCGACGGC GCGCTCCTCA CGTTCGCGCT GCCGCAGCTG AGCCGTGACC TCGCGCCGTC CGCCGCCCAG CTCGTGTGGA TCACCGACGC CTACCCGATG GTGCTGGCGG CGCTCCTCGT GCCGATGGGG GCCGTGGGCG ACCGCATCGG CCGACGCCGG CTCCTCGTGC TCGGGTGCGC CGGGTTCGCG GTCGTCACCC TCGCAGCGGC GACGGCGTCC GACCCCGTCC ACCTCATCGT CGCCCGAGCG CTGCTCGGGG TGTGCGGCGC CACGCTCATG CCGGCCTCCC TCGCGCTCCT GCGCGCGACG TTCCCGGACG CCGGGCGCCG TCGGGCCGCC GTCGCCGCAT GGGCGGCGAC GTTCGCCGTG GGCGCCGGCG CCGCGCCGTT CGTGGGCGCC GCCGTGCTGG ACGTCGCGGG CGGAGGCGCG GTGCGCGCGC TCGCCGCCCC GCTGGCCCTG GGCGTGGTGC TCGCCGCGCC CCGCCTGGTC GCCGAGTCCC GGAGCGAGCG GCCCGGGGCG CTCGACGGGT GGAGCGTCGT CTGCGTCGTC GTGGCGCTCG CGGCGCTGGT CCACGGCGCG ACGTCGCTCG CCGCGGGCGG GCCGGACGGC GTCGCGACGG TCGCCGTCGC GCTCGGGGCG GGCGCGCTGT TCGTGCGCCG CCAGCTCCGC CTGCCTCGGC CGCTGCTCGA CCTGCGTCTC CTGCGCTGCC CGGCCCTCGG GGCGTCGGTC GGCGTCAACC TGCTGAGCCA GGCGGCGTTC GTCGGCCTGG CGCTGTGGAC GTCGCAGTAC CTGCAGCTCG TGCTCGGGCT GACGCCCGCG GAGGCTGCCC GCGGCCTGGT GGCGGGACCG GCCGGCGCCG TCGTCGCCGG GCTGCTCGTC GTGCCGCTCG CGCGGCGCCT CCCGCTGCGC GTCCTCCTGC CGGGAGCGTT GCTCGTCTCG GGTGCGGGGT ACGCCCTCAC GACGGCGGGC GTCGCGTCGG CGGCGAGTGT CGCCGTCATC CTCGCGTGCG TGGGGTTCGG CGCCGGCCTC GCCGAGGCGC TGACCGGCGA CGCCGTCCTC GGCGCGGTGC CGCCGTCGCG CGCCGGGGCG GCGGCGTCCA TGGCGGAGAC GGCGTTCGAG CTCGGGGCTG CGCTCGGGGT CGCGGTGCTG GGCAGCGTGC TCGCGGCGTG CTACCGGGCG CGACTCGTGG TGCCGGGCGC GCTGCCGGCC GGTGACGCGG ACGCGGCCGC GCGCACGCTC GGCGGCGCGT CGGGCGTGGC TCACCGGAAC CCGGAGCTGG GCGACGAGCT GATGGTCTCC GCGCGGGAGG CGTTCGCCTC GGGCGTCCAG GCGACGTCCG CCGTCTGCCT CGTGCTCACG CTCGTGGCGG CGGTGGGTGC CGGCGTGATG CTCCGGCGCA GGTGA
|
Protein sequence | MPVATTADGA APASMRPGAV VVGRRPAGRA AGRGAAPAAP RPWAALAVLV LPVLAVSLDG ALLTFALPQL SRDLAPSAAQ LVWITDAYPM VLAALLVPMG AVGDRIGRRR LLVLGCAGFA VVTLAAATAS DPVHLIVARA LLGVCGATLM PASLALLRAT FPDAGRRRAA VAAWAATFAV GAGAAPFVGA AVLDVAGGGA VRALAAPLAL GVVLAAPRLV AESRSERPGA LDGWSVVCVV VALAALVHGA TSLAAGGPDG VATVAVALGA GALFVRRQLR LPRPLLDLRL LRCPALGASV GVNLLSQAAF VGLALWTSQY LQLVLGLTPA EAARGLVAGP AGAVVAGLLV VPLARRLPLR VLLPGALLVS GAGYALTTAG VASAASVAVI LACVGFGAGL AEALTGDAVL GAVPPSRAGA AASMAETAFE LGAALGVAVL GSVLAACYRA RLVVPGALPA GDADAAARTL GGASGVAHRN PELGDELMVS AREAFASGVQ ATSAVCLVLT LVAAVGAGVM LRRR
|
| |