Gene Bcav_3408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3408 
Symbol 
ID7859181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3810070 
End bp3811644 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content80% 
IMG OID643867507 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002883412 
Protein GI229821886 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTCG CCACCACGGC CGACGGTGCC GCGCCGGCGT CGATGCGACC GGGCGCCGTC 
GTCGTCGGAC GCCGCCCCGC GGGACGGGCC GCCGGTCGCG GTGCCGCGCC CGCCGCCCCG
CGGCCGTGGG CGGCGCTCGC GGTGCTCGTC CTGCCCGTGC TCGCCGTCAG CCTCGACGGC
GCGCTCCTCA CGTTCGCGCT GCCGCAGCTG AGCCGTGACC TCGCGCCGTC CGCCGCCCAG
CTCGTGTGGA TCACCGACGC CTACCCGATG GTGCTGGCGG CGCTCCTCGT GCCGATGGGG
GCCGTGGGCG ACCGCATCGG CCGACGCCGG CTCCTCGTGC TCGGGTGCGC CGGGTTCGCG
GTCGTCACCC TCGCAGCGGC GACGGCGTCC GACCCCGTCC ACCTCATCGT CGCCCGAGCG
CTGCTCGGGG TGTGCGGCGC CACGCTCATG CCGGCCTCCC TCGCGCTCCT GCGCGCGACG
TTCCCGGACG CCGGGCGCCG TCGGGCCGCC GTCGCCGCAT GGGCGGCGAC GTTCGCCGTG
GGCGCCGGCG CCGCGCCGTT CGTGGGCGCC GCCGTGCTGG ACGTCGCGGG CGGAGGCGCG
GTGCGCGCGC TCGCCGCCCC GCTGGCCCTG GGCGTGGTGC TCGCCGCGCC CCGCCTGGTC
GCCGAGTCCC GGAGCGAGCG GCCCGGGGCG CTCGACGGGT GGAGCGTCGT CTGCGTCGTC
GTGGCGCTCG CGGCGCTGGT CCACGGCGCG ACGTCGCTCG CCGCGGGCGG GCCGGACGGC
GTCGCGACGG TCGCCGTCGC GCTCGGGGCG GGCGCGCTGT TCGTGCGCCG CCAGCTCCGC
CTGCCTCGGC CGCTGCTCGA CCTGCGTCTC CTGCGCTGCC CGGCCCTCGG GGCGTCGGTC
GGCGTCAACC TGCTGAGCCA GGCGGCGTTC GTCGGCCTGG CGCTGTGGAC GTCGCAGTAC
CTGCAGCTCG TGCTCGGGCT GACGCCCGCG GAGGCTGCCC GCGGCCTGGT GGCGGGACCG
GCCGGCGCCG TCGTCGCCGG GCTGCTCGTC GTGCCGCTCG CGCGGCGCCT CCCGCTGCGC
GTCCTCCTGC CGGGAGCGTT GCTCGTCTCG GGTGCGGGGT ACGCCCTCAC GACGGCGGGC
GTCGCGTCGG CGGCGAGTGT CGCCGTCATC CTCGCGTGCG TGGGGTTCGG CGCCGGCCTC
GCCGAGGCGC TGACCGGCGA CGCCGTCCTC GGCGCGGTGC CGCCGTCGCG CGCCGGGGCG
GCGGCGTCCA TGGCGGAGAC GGCGTTCGAG CTCGGGGCTG CGCTCGGGGT CGCGGTGCTG
GGCAGCGTGC TCGCGGCGTG CTACCGGGCG CGACTCGTGG TGCCGGGCGC GCTGCCGGCC
GGTGACGCGG ACGCGGCCGC GCGCACGCTC GGCGGCGCGT CGGGCGTGGC TCACCGGAAC
CCGGAGCTGG GCGACGAGCT GATGGTCTCC GCGCGGGAGG CGTTCGCCTC GGGCGTCCAG
GCGACGTCCG CCGTCTGCCT CGTGCTCACG CTCGTGGCGG CGGTGGGTGC CGGCGTGATG
CTCCGGCGCA GGTGA
 
Protein sequence
MPVATTADGA APASMRPGAV VVGRRPAGRA AGRGAAPAAP RPWAALAVLV LPVLAVSLDG 
ALLTFALPQL SRDLAPSAAQ LVWITDAYPM VLAALLVPMG AVGDRIGRRR LLVLGCAGFA
VVTLAAATAS DPVHLIVARA LLGVCGATLM PASLALLRAT FPDAGRRRAA VAAWAATFAV
GAGAAPFVGA AVLDVAGGGA VRALAAPLAL GVVLAAPRLV AESRSERPGA LDGWSVVCVV
VALAALVHGA TSLAAGGPDG VATVAVALGA GALFVRRQLR LPRPLLDLRL LRCPALGASV
GVNLLSQAAF VGLALWTSQY LQLVLGLTPA EAARGLVAGP AGAVVAGLLV VPLARRLPLR
VLLPGALLVS GAGYALTTAG VASAASVAVI LACVGFGAGL AEALTGDAVL GAVPPSRAGA
AASMAETAFE LGAALGVAVL GSVLAACYRA RLVVPGALPA GDADAAARTL GGASGVAHRN
PELGDELMVS AREAFASGVQ ATSAVCLVLT LVAAVGAGVM LRRR