Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3406 |
Symbol | |
ID | 7859179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3807821 |
End bp | 3809407 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643867505 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002883410 |
Protein GI | 229821884 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGG TCGCGTCGAC GAGCCTCGCG ACGAGCACGC CGGCGCACGC GGACGCGCGC GGCGGTGGCG CCCCGCCCCG CGCCGGGCGC CGGGAGTGGC TGGCTCTCGC CGTCCTCATG CTCCCCGTGC TGCTCGTGAG CATCGACAAC ACGGTGCTCT CGTTCGCGCT GCCGCAGATC AGCCAGGACC TCGGACCGAG CGCCACGCAG CTCCTGTGGA TCGTCGACAT CTACGCGCTG CTCCTCGCCG GTCTCCTGGT GACGATGGGC ACGCTCGGCG ACCGGGTCGG CCGCCGCCTG CTGCTGCTCG TCGGGGCCGC CGGCTTCGGC CTCGTGAGCG TGTACGCCGC GTTCGCCACC GACGCCGGGC AGCTCATCGT CGCGCGGGCG CTGCTCGGGG TGTTCGGTGC GACGCTCATG CCCTCGACCC TCGCCCTGCT GCGCTCGACG TTCCTCGACG CCGGTCAGCG TCGCCTCGCC ATCGCCGTCT GGGCGGCCGC GTTCTCGGGC GGCTCGGCGC TCGGCCCCGT GGTGGGTGGA TGGCTGCTCG AGCACTTCTG GTGGGGCTCG GTCTTCCTCA TCAACGTGCC GGTGCTCGCC GTGCTGCTCG TGACGGCGCC GTTGCTCCTG CGTGAGTCGC GCGGCACGCG CGCCGGCCGG TTCGACCTCG TGAGCGTCGC GCTGTCGATC CTCGCGATGC TCCCGCTCGT GTTCGGCATC AAGACGATCG TGCACGACGG CGTCACGGGC GTCGGGATCG GGGCGCTCGC CGTCGCGATC GCCTCCGGGG TGCTGTTCGT CCGGCGGCAG CTCCGCCGCG ACGAGCCGCT GCTCGACGTC CGCCTGTTCA CGCGCGGCGT GTTCACGGCG TCGGTGCTGG CGAACCTGCT CGCGGTCTTC GCGCTCGCCG GCCTGGTGTT CTACGTGTCG CAGTACCTGC AGCTCGTCCT CGGCCTCGAG CCCATGGACG CCGGGCTGCG GCTGGTCCCG GGCGCGCTGG CCGCGATCGC GATGGGTCTG CTCGCCGTCG TCCTCGCGCG GCACGCGCCC TTGTACGTGC TCGTGCCGGC CGGCCTGCTG CTGTCGGCGG CCGGGTACGC TCTGGCCACG ACGCTGACGT CGACGTCGGA GGCCACGATC GTCGTCGTGT TCGCGCTCGT GGGCGCGGGG GCCGGGCTCG CCGAGACGCT CACGAACGAC GCGATCCTCG CGTCGGTGCC CACCGAGCGG GCCGGGGCGG CGTCGGCGAT CTCGGAGACC GCGTACGAGC TCGGGGCGGC CACGGGGGTC GCGGTGCTGG GCAGCGTCCT CTCCGCGACG TACCGCGGCG CGCTCGACCT GCCGGCCGGG CTGAGTGCCG AGCAGGCGAC GACGGCGACC GAGACGCTCG GCGGGGCCGT CGCCGTCGCG GGCGAGGTGC CCTTCGGCGA GGCGGTGCTC GACGCGGCGC GGGAGGCGTT CTCGCGCGGG GTCGACCTCA CGTCGGCCAT CGGCGCCGTG ATCCTCGTCG GGGCGGCGAT CGTCACGGCG ATCCTGCTGC GGCGGGCCAC CCGGACGGGC GGCCGGGCCG TCGCCGGGGC ACGATGA
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Protein sequence | MSQVASTSLA TSTPAHADAR GGGAPPRAGR REWLALAVLM LPVLLVSIDN TVLSFALPQI SQDLGPSATQ LLWIVDIYAL LLAGLLVTMG TLGDRVGRRL LLLVGAAGFG LVSVYAAFAT DAGQLIVARA LLGVFGATLM PSTLALLRST FLDAGQRRLA IAVWAAAFSG GSALGPVVGG WLLEHFWWGS VFLINVPVLA VLLVTAPLLL RESRGTRAGR FDLVSVALSI LAMLPLVFGI KTIVHDGVTG VGIGALAVAI ASGVLFVRRQ LRRDEPLLDV RLFTRGVFTA SVLANLLAVF ALAGLVFYVS QYLQLVLGLE PMDAGLRLVP GALAAIAMGL LAVVLARHAP LYVLVPAGLL LSAAGYALAT TLTSTSEATI VVVFALVGAG AGLAETLTND AILASVPTER AGAASAISET AYELGAATGV AVLGSVLSAT YRGALDLPAG LSAEQATTAT ETLGGAVAVA GEVPFGEAVL DAAREAFSRG VDLTSAIGAV ILVGAAIVTA ILLRRATRTG GRAVAGAR
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