Gene Bcav_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3406 
Symbol 
ID7859179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3807821 
End bp3809407 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content75% 
IMG OID643867505 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002883410 
Protein GI229821884 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGG TCGCGTCGAC GAGCCTCGCG ACGAGCACGC CGGCGCACGC GGACGCGCGC 
GGCGGTGGCG CCCCGCCCCG CGCCGGGCGC CGGGAGTGGC TGGCTCTCGC CGTCCTCATG
CTCCCCGTGC TGCTCGTGAG CATCGACAAC ACGGTGCTCT CGTTCGCGCT GCCGCAGATC
AGCCAGGACC TCGGACCGAG CGCCACGCAG CTCCTGTGGA TCGTCGACAT CTACGCGCTG
CTCCTCGCCG GTCTCCTGGT GACGATGGGC ACGCTCGGCG ACCGGGTCGG CCGCCGCCTG
CTGCTGCTCG TCGGGGCCGC CGGCTTCGGC CTCGTGAGCG TGTACGCCGC GTTCGCCACC
GACGCCGGGC AGCTCATCGT CGCGCGGGCG CTGCTCGGGG TGTTCGGTGC GACGCTCATG
CCCTCGACCC TCGCCCTGCT GCGCTCGACG TTCCTCGACG CCGGTCAGCG TCGCCTCGCC
ATCGCCGTCT GGGCGGCCGC GTTCTCGGGC GGCTCGGCGC TCGGCCCCGT GGTGGGTGGA
TGGCTGCTCG AGCACTTCTG GTGGGGCTCG GTCTTCCTCA TCAACGTGCC GGTGCTCGCC
GTGCTGCTCG TGACGGCGCC GTTGCTCCTG CGTGAGTCGC GCGGCACGCG CGCCGGCCGG
TTCGACCTCG TGAGCGTCGC GCTGTCGATC CTCGCGATGC TCCCGCTCGT GTTCGGCATC
AAGACGATCG TGCACGACGG CGTCACGGGC GTCGGGATCG GGGCGCTCGC CGTCGCGATC
GCCTCCGGGG TGCTGTTCGT CCGGCGGCAG CTCCGCCGCG ACGAGCCGCT GCTCGACGTC
CGCCTGTTCA CGCGCGGCGT GTTCACGGCG TCGGTGCTGG CGAACCTGCT CGCGGTCTTC
GCGCTCGCCG GCCTGGTGTT CTACGTGTCG CAGTACCTGC AGCTCGTCCT CGGCCTCGAG
CCCATGGACG CCGGGCTGCG GCTGGTCCCG GGCGCGCTGG CCGCGATCGC GATGGGTCTG
CTCGCCGTCG TCCTCGCGCG GCACGCGCCC TTGTACGTGC TCGTGCCGGC CGGCCTGCTG
CTGTCGGCGG CCGGGTACGC TCTGGCCACG ACGCTGACGT CGACGTCGGA GGCCACGATC
GTCGTCGTGT TCGCGCTCGT GGGCGCGGGG GCCGGGCTCG CCGAGACGCT CACGAACGAC
GCGATCCTCG CGTCGGTGCC CACCGAGCGG GCCGGGGCGG CGTCGGCGAT CTCGGAGACC
GCGTACGAGC TCGGGGCGGC CACGGGGGTC GCGGTGCTGG GCAGCGTCCT CTCCGCGACG
TACCGCGGCG CGCTCGACCT GCCGGCCGGG CTGAGTGCCG AGCAGGCGAC GACGGCGACC
GAGACGCTCG GCGGGGCCGT CGCCGTCGCG GGCGAGGTGC CCTTCGGCGA GGCGGTGCTC
GACGCGGCGC GGGAGGCGTT CTCGCGCGGG GTCGACCTCA CGTCGGCCAT CGGCGCCGTG
ATCCTCGTCG GGGCGGCGAT CGTCACGGCG ATCCTGCTGC GGCGGGCCAC CCGGACGGGC
GGCCGGGCCG TCGCCGGGGC ACGATGA
 
Protein sequence
MSQVASTSLA TSTPAHADAR GGGAPPRAGR REWLALAVLM LPVLLVSIDN TVLSFALPQI 
SQDLGPSATQ LLWIVDIYAL LLAGLLVTMG TLGDRVGRRL LLLVGAAGFG LVSVYAAFAT
DAGQLIVARA LLGVFGATLM PSTLALLRST FLDAGQRRLA IAVWAAAFSG GSALGPVVGG
WLLEHFWWGS VFLINVPVLA VLLVTAPLLL RESRGTRAGR FDLVSVALSI LAMLPLVFGI
KTIVHDGVTG VGIGALAVAI ASGVLFVRRQ LRRDEPLLDV RLFTRGVFTA SVLANLLAVF
ALAGLVFYVS QYLQLVLGLE PMDAGLRLVP GALAAIAMGL LAVVLARHAP LYVLVPAGLL
LSAAGYALAT TLTSTSEATI VVVFALVGAG AGLAETLTND AILASVPTER AGAASAISET
AYELGAATGV AVLGSVLSAT YRGALDLPAG LSAEQATTAT ETLGGAVAVA GEVPFGEAVL
DAAREAFSRG VDLTSAIGAV ILVGAAIVTA ILLRRATRTG GRAVAGAR