| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3405 |
|---|
| Symbol | |
|---|
| ID | 7859178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 3807235 |
|---|
| End bp | 3807816 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643867504 |
|---|
| Product | Appr-1-p processing domain protein |
|---|
| Protein accession | YP_002883409 |
|---|
| Protein GI | 229821883 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCCG GGACGGTCGT GCGACGAGAG GCAGTGCTCG GCGACATCAC CGCCCAGGAC
GTGGACGTCG TCGTCAACGC CGCGAACCCC TCGCTGCTCG GCGGCGGGGG CGTCGACGGC
GCGATCCACC GGGCGGCCGG GCCGAGCCTG CTCGCCGAGT GCCAGGACCT GCGGCGTACC
GTGCTGCCGC GCGGGCTGAG CGTCGGCGAC GCCGTCGCCA CCGGCGCCGG CAACCTCCCC
GCGCTATGGG TGGTGCACAC GGTCGGTCCG AACGCCCACG TCGGCCAGCG CGACCCGGCG
CTCCTGGCCT CGTGCTTCAC GCGCAGCCTC GACGTCGCGG GCGGGCTCGG CGCCCGCTCC
GTCGCGTTCC CGGCCGTCAG CGCCGGAGTC TTCGGGTGGG ACGTGGACGT GGTCGCGCGC
ATCGCCGTCG ACTCCGTCGA CACGTGGCTC GACGGTGCCG ACCCGGCGGC GAGCGCGCTC
GAGCTCGTGC GGTTCGTGCT GTTCTCGGCG GCGGCGCTCG CGGCGTTCGA GGCCGCGTTG
GGCATCGTGC GCGACGACGA CGACGAGCGC AGCGCCGGCT GA
|
|---|
| Protein sequence | MSPGTVVRRE AVLGDITAQD VDVVVNAANP SLLGGGGVDG AIHRAAGPSL LAECQDLRRT
VLPRGLSVGD AVATGAGNLP ALWVVHTVGP NAHVGQRDPA LLASCFTRSL DVAGGLGARS
VAFPAVSAGV FGWDVDVVAR IAVDSVDTWL DGADPAASAL ELVRFVLFSA AALAAFEAAL
GIVRDDDDER SAG
|
|---|
| |