Gene Bcav_3403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3403 
Symbol 
ID7859176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3802756 
End bp3804372 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content74% 
IMG OID643867502 
ProductABC transporter related 
Protein accessionYP_002883407 
Protein GI229821881 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCC TCGAGGTCGA CCACCTGTCG GTCACGTACG CCCCGCGCGA CGGCGTCCCG 
GTGGACGCCG TGCGCGACGT CAGCCTCGTC GTCGACCAGG GTGAGTTCGT CGGCCTGGTC
GGCGAGTCCG GGTCGGGCAA GTCCACGCTC GGCAACGCGA TCCTCCAGCT GCTCGACAAG
CCGGCCCGGC GCACGGCCGG GTCGGTCCGG TTCGACGGGC AGGATCTCGC CGACCTCGAC
CCCGAGGAGC TGCGCCGGCT GCGCTGGGTC GACCTGTCGA CGGTGTTCCA GTCGAGCATG
AACTCGCTGA ACCCGGTCAT CACCGTCGCG GCGCAGTTCG AGGACACGTT CCGCGCGCAC
GACGAGCGGC TCTCCCCCGC CGACCTCCGC CGGCGCGCCG TCGAGGCGTT GGCGATGGTG
TCGCTCGACG AACGGACGCT CACGTCGTAC GCGCACGAGC TGTCCGGCGG GATGCGGCAG
CGCGTCTCGC TCGCGCTGGC GCTCGCGCTC CGGCCCCGCT TCGTGCTGCT GGACGAGCCG
ACCACCGGGC TCGACGTGCT CGTGCAGCGG CGGATCCTCG ACCGGCTGCG CGCCCTGCAG
GCCGACCTGG GCTTCGCCGT CCTGTTCGTC ACGCACGACA TCGGCGCCGT CCTCGAGATG
GCCGACCGGA TGCTCGTGAT GACCGAGGGC GAGATCGTCG AGGACGCCGC GGCTGCCGAC
GTGCTGCTCC GCCCTGCGCA CCCGTACACG CAGTCGCTCC TGGCGTCGTA CGCAGCGACC
CGCACCCCGG TCCCCCACCG GGCCGCGGAC GCCGTCGAGC CGGAGGTCGT GCTGCGCGTC
GAGGACGTGC GGCGCCGGTA CGTCACCGGG CGCGGCCGCA ACCGGACGGC GGTCCAGGCT
CTCGACGGCG TCTCGCTCGA GCTGCGCTCG GGGAAGGTCA CGGCCCTGGT CGGGCAGAGC
GGGTCGGGCA AGTCGACGAT CGCGCGCATG GTGCTCGGCG TCGAGCGGCC GGACAGCGGC
CGGGTGCTGT TCGGCGACGT CCAGGTCGAT GCGCTGCGCC GGGCGGGGCT GCGCGACTAC
CGGCGCCACG TCCAGATGGT GTTCCAGGAC CCCTTCGCCT CGCTCAACCC CACGGTACCG
GTGGGGGCCG CGCTCGCGCG CCCCCTGCTG AACTTCGGCG GGGCCACACG TGCGGACGTC
CGCGACCGCG CCGCGGCCCT GCTCGAGCAG GTCGGGCTCA CGCCGACGGC GCACTACCTC
GAGCGCCTGC CCCACCAGCT GTCCGGCGGG CAGCGCCAGC GCGTGGTGAT CGCCCGGGCG
CTCGCGCCGG ACCCGGCGAT CCTCGTGGCC GACGAGCCCG TCTCGATGCT CGACGTGTCG
ATCCGCGCCG AGATCCTCGC GCTCCTCGCC TCGCTCGTCG CGGAACGCGA GCTGGCGATG
CTGTACATCA CCCACGACCT GCTGTCCGCT CGCGCGCTGG CCGACGACGT CGTCGTCCTG
TCCGAGGGCG CCGTCGTCGA GCACGGGCCG ACGGCGCGGG TGGTCGAGCA ACCCGAGCAC
CCGTACACGC GGGAGCTGCT CGCGGCGATC CCGGACCCGT ACGCCGACGC CGGCTGA
 
Protein sequence
MALLEVDHLS VTYAPRDGVP VDAVRDVSLV VDQGEFVGLV GESGSGKSTL GNAILQLLDK 
PARRTAGSVR FDGQDLADLD PEELRRLRWV DLSTVFQSSM NSLNPVITVA AQFEDTFRAH
DERLSPADLR RRAVEALAMV SLDERTLTSY AHELSGGMRQ RVSLALALAL RPRFVLLDEP
TTGLDVLVQR RILDRLRALQ ADLGFAVLFV THDIGAVLEM ADRMLVMTEG EIVEDAAAAD
VLLRPAHPYT QSLLASYAAT RTPVPHRAAD AVEPEVVLRV EDVRRRYVTG RGRNRTAVQA
LDGVSLELRS GKVTALVGQS GSGKSTIARM VLGVERPDSG RVLFGDVQVD ALRRAGLRDY
RRHVQMVFQD PFASLNPTVP VGAALARPLL NFGGATRADV RDRAAALLEQ VGLTPTAHYL
ERLPHQLSGG QRQRVVIARA LAPDPAILVA DEPVSMLDVS IRAEILALLA SLVAERELAM
LYITHDLLSA RALADDVVVL SEGAVVEHGP TARVVEQPEH PYTRELLAAI PDPYADAG