| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3401 |
|---|
| Symbol | |
|---|
| ID | 7859174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 3800829 |
|---|
| End bp | 3801824 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643867500 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002883405 |
|---|
| Protein GI | 229821879 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.621344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGTACT TCCTGCGCCG GCTGGGGTTC TTCCTCGCCA CGCTGTGGGC GGCGGTGACG
CTGAACTTCG TCATCCCCCG CCTGCAGCCG GGCGACCCCG CCGAGGCGCT CGTGCAACGG
CTGACCGGTG AGGGCACCGC CCTGGACCCG CAACAGGTCC AGGCGGTGCG CCTCATGCTC
GGCATCGAGG GCGAGGGCAT CGTCCAGCAG TACCTCGACT ACCTCGGCGC GGTGGTGCGA
GGCGACTTCG GGCCGTCGTA CACGTACTTC CCGTACTCCG TGACCGAGGT CATCTCGCAG
GCGTTGCCGT GGACGCTCGT GCTCGTCGGG ACGACGACGA TCATCTCGTT CGTCGTCGGC
ACGCTGCTCG GCACGTGGGC GGCCTACCGC CGCGGCACGC GCGTGGACTC GGTGCTGACG
CTCGGGTCGA CGTTCCTCTC GACGCTGCCG TTCTTCTGGA TCGCGCTCAT GCTCATCTAC
GTCTTCGCGT TCCAGCTGCA GTGGTTCCCG GAGAGCGGCG GCTACGGGCC GGGATCCACC
CCCGGCTGGA ACTGGACGTT CATCTCGGAC GCGTTCCAGC ACTCCGTGCT GCCGGCCCTG
TCGCTGCTCA TCACGGGGCC GCTCGGCTGG ATCCTCGCGA TGCGCAACAA CATGGTGCAG
ATGCTCGGCG AGGACCACAC GCGGTTCGCC CGCGCCCGCG GGCTCCGGGA CCGGCGCATC
GCGCTCACCT ACGGGGGCCG GATCGCGATC CTGCCGAGCG TCACGGGGTT CGCCCTGGCG
CTCGGGGGCC TGCTCGGCGG CACCCTCCTC GTGGAGACGA TCTTCAACTA CCCCGGGCTG
GGCCGCCTGC TGCTGGAGTC GGTGAACAAC CGGGACTACC CGCTGCTCCA GGCGCTGTTC
CTGCTCACGA CGACGGGCGT GCTCCTCGGC AACCTCATGG CCGACTTCCT GTACGGCGTC
CTCGATCCAC GCGTCCGACG GGAGGTCGCG ACATGA
|
|---|
| Protein sequence | MLYFLRRLGF FLATLWAAVT LNFVIPRLQP GDPAEALVQR LTGEGTALDP QQVQAVRLML
GIEGEGIVQQ YLDYLGAVVR GDFGPSYTYF PYSVTEVISQ ALPWTLVLVG TTTIISFVVG
TLLGTWAAYR RGTRVDSVLT LGSTFLSTLP FFWIALMLIY VFAFQLQWFP ESGGYGPGST
PGWNWTFISD AFQHSVLPAL SLLITGPLGW ILAMRNNMVQ MLGEDHTRFA RARGLRDRRI
ALTYGGRIAI LPSVTGFALA LGGLLGGTLL VETIFNYPGL GRLLLESVNN RDYPLLQALF
LLTTTGVLLG NLMADFLYGV LDPRVRREVA T
|
|---|
| |