| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3400 |
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| Symbol | |
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| ID | 7859173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 3799115 |
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| End bp | 3800818 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643867499 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002883404 |
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| Protein GI | 229821878 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.110204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGTG CACGCAGATG GGGCAGACGT GCGATCGCCG CGATGACGGT GGCCGCCGTC
GTCGGCCTGG CCGCCTGCAC CGGCACCGAG GGCCAGGACG ACGCGACCAC CGCCGAGGAG
GGCATGGTCC CGTATCTCAA CTTCGGCGGC TTCGGCGGCG GGGCGAACCC GCAGGCGAAC
TACAACCCGT ACACGCCGAC CACGCGGCTG TCGGCCGTCG ACTACGTCTA CGAGACGCTG
TTCGTCATCA ACGACTACAC GTGCGAGGAG GTCCCCTGGC TCGCGACGGA GTACGAGTGG
GTCGACGACC GCACGGTCGA CCTCACGATG CGTGACGGCG TGACGTGGAA CGACGGCGAG
GCGTTCGACG CCGAGGACGT CGTGTTCACG TTCCAGATGC TCAAGGAGTA CCCCGCCCTC
GACGAGCAGG GCGTGTGGCG CGTGCTGGAG GACGTCGTCG CCTCCGACGA CGGCACCGTC
CGGATGACGT TCACCGAGCC CGGTCTCGCG TTCTTCACGC AGATCGCCGT CGTGAAGATC
GTGCCGGAGC ACATCTGGTC GGCGGTCGAG GACCCGGTGA CGTTCACGAA CTCCGAGGCG
CCGGTCGGCA CGGGCCCGAT GACCGTCCAG TCGTTCAACG GGCAGCAGCT CGTCATCGAG
CGCAACCCCG ACCACTGGAA CGCCGACGAG ATCCGGGTGC AGGAGATCCG GTTCTCCAAG
GCCGACGACG GCGGGCAGGT CGACCAGCTC AAGCTCATCC GGGGCGACTA CGACATGAAC
GCGATGTTCA TCCCGAACAT CGACGAGGTC TACGTGGCCG AGGACCCGGA GAACAACCAC
TACTGGTTCC CCGCCGGCTC GCCGATCTCG CTGTACCTGA ACCTCGAGAT GGCGCCGTTC
GACGACGTCG CGTTCCGGCA GGCGATCGCC CAGGCGATCA ACCGCGACGA GATCATCGAG
CGCGCCCAGC AGGGCTACGT CGACGCCGCG AGCCAGACCG GGCTGGTGCT GCCCGGCCAG
TCGGACTGGC TGCCCGAGCA GTACGCCGAC GGCGCGTACG TCGGCTTCGA CGTCGACAGC
GCCGCCGCGG ACCTCGACGC CGCCGGCTAC ACCACCGACT CGCAGGGCCG CCGCCTCGAC
GCCGACGGTC AGCCGATGAC GTTCGAGCTC ATCGTCCCCG GCGGCTGGAA CGACTGGGTG
ATCGCCGCGG AGGTCATCCG CGACAACCTC GCCGAGGTGG GCATCGGCGT CGACGTCCAG
ACGCCGACGC CGGAGGTCGT CACGCAGGAC CGGCTCCGCG GGAACTACGA GATGACGTTC
GGCGTGCGCG GCGGCTCGTG CCACATGCTG CGCAACTTCG CGGAGCCGCT GGGCAGCGCG
TCGACGGCGC CGATCGGCGA GGAGACGACG CCGAGCGGCC AGCCGGTCAC GAACGAGGTC
CGCTGGGTCG ACGAGGAGAC GGACGCCCTG CTGGAGGAGC TGCGCGTGGC CACGGATCCC
GAGGACCAGC GCGCCGCCGT CGCCGGCCTG ACCGAGATCA TGGTCGAGGA GATGCCGTAC
ATCCAGCTCT GGTACGGCGC CAACTGGTTC CAGTACTCCA CCCGGAACGC CGTCGGCTGG
CCGAGCGAGG ACGACCCGTA CGCCAAGCCC AGCAACATGC TGCTCGTCCT GCAGAACCTG
CGCCCGGCCT CGACCGGCGA CTGA
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| Protein sequence | MSSARRWGRR AIAAMTVAAV VGLAACTGTE GQDDATTAEE GMVPYLNFGG FGGGANPQAN
YNPYTPTTRL SAVDYVYETL FVINDYTCEE VPWLATEYEW VDDRTVDLTM RDGVTWNDGE
AFDAEDVVFT FQMLKEYPAL DEQGVWRVLE DVVASDDGTV RMTFTEPGLA FFTQIAVVKI
VPEHIWSAVE DPVTFTNSEA PVGTGPMTVQ SFNGQQLVIE RNPDHWNADE IRVQEIRFSK
ADDGGQVDQL KLIRGDYDMN AMFIPNIDEV YVAEDPENNH YWFPAGSPIS LYLNLEMAPF
DDVAFRQAIA QAINRDEIIE RAQQGYVDAA SQTGLVLPGQ SDWLPEQYAD GAYVGFDVDS
AAADLDAAGY TTDSQGRRLD ADGQPMTFEL IVPGGWNDWV IAAEVIRDNL AEVGIGVDVQ
TPTPEVVTQD RLRGNYEMTF GVRGGSCHML RNFAEPLGSA STAPIGEETT PSGQPVTNEV
RWVDEETDAL LEELRVATDP EDQRAAVAGL TEIMVEEMPY IQLWYGANWF QYSTRNAVGW
PSEDDPYAKP SNMLLVLQNL RPASTGD
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