| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3388 |
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| Symbol | |
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| ID | 7860354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 3773851 |
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| End bp | 3775494 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643867487 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002883392 |
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| Protein GI | 229821866 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCA CCCTGTCCCG TCGCACGTTC TTCGGCGTCA CGGGCGCCCT CGGCACGATG
GGCCTCGCGG CCGCGTGCTC CTCCGGCGGC TCCGGCGACT CCGGGGGCGA CTCCGACGCC
ACCTCAGGCG GTGAGCGCGG CAGCGGCATC CTGCCGACGT ACCAGCCGAA CGACTCGTTC
CCGCCCGACC TCGCCTCCGA CAACGCCGAC GTCTCGCCGG CGTACTTCAC CTACCCGGAC
CCGCCCCAGG CCGTGACGGA CGGCGCCCCG GGCTCGGGCG GCTCGATCAG TGCTCTGACT
TTCACGTACG ACCCCGTCGC ACCGGAGCTG AACAGCAACG CGCTGTGGCA GAACCTCAAC
GAGGCGCTCG GCGTCGAGCT CGACCTGCAG TACACCCCGG CGGCCGACTA CGACGCCCGG
TTCGCCACGA CGATCGCCGG GAACGACCTG CCCGACCTCG TCGCCATCAA GGGCGCGCAG
CAGCAGATGC CCGCGCTGCT GGCGGCGAAG TTCACGGACC TCAGCGAACA CCTCGCCGGC
GATGCCGTCC TGGACTACCC GAACCTCGCC GCGCTGCCCA CCCCGAGCTG GCTGAGCACC
GTGTACGAGG GGAAGATCTG GGGCGTCCCG GTGCCGCGCT CCCTCATCGG CACCGTGCTC
TACACCCGTG CGGACCTGCT GGAGCAGGCC GGCCTGTCGC TGCAGCCGGA GTCGCTCGAG
GAGTTCATCG CAATGGCCGA GGCGCTCACG GACGAACGCT CCGGGAAGTG GGCGTTCGGC
CAGACGCCGA TCAACGTGAT GCTCGAGGTC AACGGCGTGG CGAACGGCTG GTCCGTCGAC
GACGCCGGCA CGTTCACGTA CAACAGCACC CGTCCGGAGT ACGAGCAGGC TCTCGCCGAC
GCGCTGGACC TCAACACCCG CGGCGTCGTG CACCCCGACG GCAACGCCGC TCAGAACACG
CAGCGCAACG AGTGGATGAT GGCCGGGACG ACGGCGTTCC AGATCGGTGG GTACGCCGGT
TGGGGCAAGT TCTACGTCCA GGGCGCCGGG ATCGACGGCT TCCGCCTCAC GGGCATGCTG
TCGCCGGCCC GCGAGGCGGG CGGCACGATG GTCCGGGCCG CCGGCAACCC GGCGTCGCAC
TTCTCGGCGA TCGCGAAGCA GGACGACCCC GAGCGCCTGC TCGAGATCCT CCGGGTGCTC
GACTGGCTGG CCGCGCCGTT CGGCAGCTCG GAGTACGTCA CCCGCCGGTT CGGCGTGGAG
GGCGAGACGT TCAACTTCGA CGGCCCCGAC CCGGTGCTCA CGTCCGCGGG CGTCAACCAG
GCCACGCTCC CGGTCCGCTA CGTCACGGAG AACTCGCCGG TCATCTACGA GGCGAACAAC
GAGCAGGCTG TGCAGGACCA GTTCGACTTC CAGGAGGCGG GGCTCCAGTA CACGGTGCCC
GACCCGACTG TCGGCCTGTA CTCCGAGACG GCCGTGAGCT CCGGTGCGGG ACCCTCCACG
GAGCTCAACG ACGTGCAGAC CGAGATCCTG CTCGGCAACC AGCCCGTCTC GACCTGGGCG
CCGGCCGTCG AGAAGTACAT GGCCGCAGCT GGTGACGCGA TCAAGGCCGA GTACGAGGAG
GCGTGGGCCC AGCTGAACGG CTGA
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| Protein sequence | MSSTLSRRTF FGVTGALGTM GLAAACSSGG SGDSGGDSDA TSGGERGSGI LPTYQPNDSF
PPDLASDNAD VSPAYFTYPD PPQAVTDGAP GSGGSISALT FTYDPVAPEL NSNALWQNLN
EALGVELDLQ YTPAADYDAR FATTIAGNDL PDLVAIKGAQ QQMPALLAAK FTDLSEHLAG
DAVLDYPNLA ALPTPSWLST VYEGKIWGVP VPRSLIGTVL YTRADLLEQA GLSLQPESLE
EFIAMAEALT DERSGKWAFG QTPINVMLEV NGVANGWSVD DAGTFTYNST RPEYEQALAD
ALDLNTRGVV HPDGNAAQNT QRNEWMMAGT TAFQIGGYAG WGKFYVQGAG IDGFRLTGML
SPAREAGGTM VRAAGNPASH FSAIAKQDDP ERLLEILRVL DWLAAPFGSS EYVTRRFGVE
GETFNFDGPD PVLTSAGVNQ ATLPVRYVTE NSPVIYEANN EQAVQDQFDF QEAGLQYTVP
DPTVGLYSET AVSSGAGPST ELNDVQTEIL LGNQPVSTWA PAVEKYMAAA GDAIKAEYEE
AWAQLNG
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