Gene Bcav_3348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3348 
Symbol 
ID7860314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3721222 
End bp3722271 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content78% 
IMG OID643867448 
Productoxidoreductase domain protein 
Protein accessionYP_002883353 
Protein GI229821827 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGG TCTCCGGGGA CACCGTCCGC GTCGGCATCC TGGGGCTCGG GAGCATCGGA 
CGCACGCACG CCGCGGCGCT CGCCCACCTC GCGGCGGGCG GCGTCGACGT CCGCGTCACC
GCCGCGAGCG GCGGCACGCC CGAGGCCCTG CGGACCTCCG GCTGGCCCGA CGCCGCGCAC
GTCCCGGCCG GCGAGCTCCT GGGGCGTGAG CTCGACGTCG TCGTCGTCGC GACGCCGAGC
GGGCAGCACG CGGAGCACGC CGTCGCCGCC CTGGAGGCGG GTGCCGACGT CGTCGTCGAG
AAGCCGCTCG CCACGACGAC GCCCGACGCT ACGCGCGTGC TGAGCGTCGC CCGCGAACGG
GGGCGCCGCG TCTTCCCGAT GGCGCAGCGC CGGCTCGAGG CCCAGCACGT CGCCATCCGG
CGCCTGCTCG ACGACGGCGC GCTCGGCACC CTCGTGCTCG GTGAGGTGCT CGTGCCGTGG
GTGCGCGACG CGGCGTACTA CGACGCCGCA CCCTGGCGCC GCGAGATGCC CGCGGGCGGC
TCGCTCATGA ACCAGGGCCT GCACTCCGTC GACCTGCTGT CGTGGTTCCT CGGCCCCCTC
GCGAGCGTGA CGGCCCAGAC GGCGGTACTC GGCGACGGCG GGCCGGCGGA GGACACGGCG
GTCGTCACCG TGCGCTCCGC GGCCGGGGCG CTCGGGATCG TCGCGACCTC CACGGCGACC
CCGCCCGGCG ACGCCGCACG CCTCACCCTG CGCACCGACC GCGGAGTGAT CGAGCTCGCG
CACACCGACG TCGTGCGGTG GGAGATCGAC GGCGTCGACC GGCCGAGCGC GTCCTCCGAC
GTCGCCGCCG GCTCGAGCGA CCCTGCCGCG ATCGGCATCG CCGGGCACGT CGAGGCGTGG
CGCGACGTGC TCGAGGCGCA CGCGACGGGC CGCGAGGCCC GCGTCCGCGC GCTCGACGGG
TGGCGAACCG TCGCCCTGAT CGACGCCGCG TACCGGTCCG CCGCGACCGG CCGGCTCGTG
GACGTGCCCG CCGCACCGGA CGGGGCATGA
 
Protein sequence
MSEVSGDTVR VGILGLGSIG RTHAAALAHL AAGGVDVRVT AASGGTPEAL RTSGWPDAAH 
VPAGELLGRE LDVVVVATPS GQHAEHAVAA LEAGADVVVE KPLATTTPDA TRVLSVARER
GRRVFPMAQR RLEAQHVAIR RLLDDGALGT LVLGEVLVPW VRDAAYYDAA PWRREMPAGG
SLMNQGLHSV DLLSWFLGPL ASVTAQTAVL GDGGPAEDTA VVTVRSAAGA LGIVATSTAT
PPGDAARLTL RTDRGVIELA HTDVVRWEID GVDRPSASSD VAAGSSDPAA IGIAGHVEAW
RDVLEAHATG REARVRALDG WRTVALIDAA YRSAATGRLV DVPAAPDGA