Gene Bcav_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3346 
Symbol 
ID7860312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3718646 
End bp3719890 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content73% 
IMG OID643867446 
ProductGlutamine--scyllo-inositol transaminase 
Protein accessionYP_002883351 
Protein GI229821825 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATG TTCTCGCGCT CGACGGCGGC GCGCCGGTCC GCACCGCACC CTTCCCGTCC 
GTGTCCTCGC CCGCGGGCCG CACGCTCGGC GTGGAGGAGG AGCGCGCCGT CGTCGACGTC
GTCCGCAGCG GCCAGCTCAA CTCCACCGTC GGCGGCGTGA CGCGCGGCTT CGAGCAGGAC
TTCGCCAGGT ACTACGGGGT GCCGCACGCG GTCGCCTCCG GCTCCGGGAC GTCGGCCATC
CACCTGGCGG TCGCCGCCGT CGACCCCGAG CCCGGCGACG AGATCATCAC GACCGGCCTC
AGCGACGCCG GGACGGTGCT GCCGATCCTC GCGCAGAACG CGGTGCCCGT GTTCGCCGAC
GTCGACCCGG CCACGGGGAA CCTCGACGTC GAGTCGGTGC GGGCCCGGAT CACCTCCCGC
ACCCGCGCGA TCATCGCCGT CCACCTCTTC GGCCAGCCGG CGCCGGTGGT CGAGCTGCGC
GCGCTGGCGG ACGACCACGG GATCGTGCTC ATCGAGGACT GCGCGCAGGC GTACCTCACG
GCGGTGAGCC CGGACGGCGC GCTCGCCGGC ACCGTGGGGC ACCTCGGCTG CTTCAGCCTG
CAGCAGTCGA AGCACATCAC CGCCGGCGAC GGCGGGCTGA CGATCACGTC CGACGACGCG
CTCGCGCGCC GGGCGCGGCT CTTCGCCGAC AAGGCCTGGC CCCGCGACAC GGACGAGCGC
ACGCACCTCT TCCTCGGGCT CAACTACCGC ATGACGGAGC TGCAGGCCGC CGTCGCGCGC
GTGCAGCTCA CGAAGCTGGC AGGCGTCGTC GAGGACCGCC GCCGCTCGGC GAAGGCACTG
ACCGACGTCG TGACGGGTCT GGCCGGGCTC ACCGCGGCCG CCTCGGAGGG CATGAGCTAC
TGGCAGTTCC CGGTCTTCAT CGACCCGGAC GTCGCGGGCG CCGACGCGCA CTGGTACGCG
CGGGCGCTCG CTGCCGAGGG GATCCCGGCC TCGGGCGGGT ACATCCAGCG GCCGCTCTAC
CTGACGCCGG TGTTCACCGA GCGCCGGACG TACGGGTCCT CCGGGTATCC GCTCTCGGTT
CCGCCGGCGG ACTCCGTGCC GGAGTACGCG CCCGGACTCT GCCCCGTGAC CGAGGAGCTC
ATCGGCGCGC GGCTGCTCGT CATCGCGTGG AACGAGAAGT ACACCTCCGA CGACGTCGCC
GACATCGCCG CCGCGCTCGA GAAGGTGCAC GCCTCCCGGG CCTGA
 
Protein sequence
MSDVLALDGG APVRTAPFPS VSSPAGRTLG VEEERAVVDV VRSGQLNSTV GGVTRGFEQD 
FARYYGVPHA VASGSGTSAI HLAVAAVDPE PGDEIITTGL SDAGTVLPIL AQNAVPVFAD
VDPATGNLDV ESVRARITSR TRAIIAVHLF GQPAPVVELR ALADDHGIVL IEDCAQAYLT
AVSPDGALAG TVGHLGCFSL QQSKHITAGD GGLTITSDDA LARRARLFAD KAWPRDTDER
THLFLGLNYR MTELQAAVAR VQLTKLAGVV EDRRRSAKAL TDVVTGLAGL TAAASEGMSY
WQFPVFIDPD VAGADAHWYA RALAAEGIPA SGGYIQRPLY LTPVFTERRT YGSSGYPLSV
PPADSVPEYA PGLCPVTEEL IGARLLVIAW NEKYTSDDVA DIAAALEKVH ASRA