Gene Bcav_3345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3345 
Symbol 
ID7860311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3715491 
End bp3716900 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content73% 
IMG OID643867445 
ProductHNH nuclease 
Protein accessionYP_002883350 
Protein GI229821824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGGTC AGACGATCGC GCCGGTGTGC CCGCTCGTGG GGGAGCTGGT CGGCGACGGT 
GCCGGTGACG TCGACGCGGT CGCCCACATC CTGCGTGGCC TGGCGCAGGC GCGCCGGATC
GTCCGTGCCA GCACGTCCTC CGCGTCCGGC ACGGTCTCGG ACGGCGACAG CGAGGCCGGC
GACGACGGCG ACGGCGCCAG CGGCACGGAG GCGGTGGACG GTTCCGCGCA GCTTGCGGCC
ATGGAGCGCG TGCTGGTGGA CGCCGCCCGT GAGGTCGACG CGGACGATGT GCGGCGCCTC
ACGGATCGAT GCCTGCACCT GCTGGACCAG GACGGACCGG CTCCGAGCGA GGGGGAGCTG
GAACGGTTGC AGGGTGTGTT CTTCAGCGGT CGGCGTGACG GGCTGCACCA GATCCGGATC
ATCACCGACG ACGCCGGTCG GGAGGTCCTC GAGACGATCT TCGCCACCGG GACGAACCCG
CGCGTGGTCA CCACGACCTG CGACCCCGAC GCACCCCTGC CCGGGAACGA CGGCGCCTGC
GACGTCGCGG CGGCAGACGG TGTGGACGCC GCCGCCGCGG ACACGGCCGG TGCCGTCCCT
CCTGCCGCAG CCGGTCCGGG TCCGGGTCCA GGTACGGATG CGGCGACCTT GGCAGGTGAC
GTCTCAGATG TGGCGAGCGA TGCAAGTGCC GCCTCGCCCG TGGCGAGCGA CGCAGGTGTC
GCCTCAGGCG CTTCGAGTGA TTCAAGCGCC GCCTCAGACG CGGCGAGCGA CGCAGACCTC
GCGGGCGGAG CCGCTGCGGA GGTACCCGTT GCGCGGGACG GGCGTTCCCT GGCGCGGCGC
CGCCTGGACG CCCTGTTGGC GGCGTGCGGT GCTGCGCTGC GGTCGGCCGA GCTGCCCGCG
ACGGGCGGGC TCCCCACCCA GGTGATGGTC ACCATGTCGT TGGAGGAGCT GCGCGCTGGT
CTGGGCTCGG CGCACCTGCC CTACACGGGG CCAGTGCCGG TTCGCGCGGT GCGACGGCTG
GCGTGCGATG CGGGGGTCAT CCCGGTCGTC CTCGGCACGA GCGGCCGGGT GCTCGACGTC
GGCCGGGCCA ATCGGCTCTT TCGCGACAGC ATCCGTAGGG CGCTCGTCGC CCGCGACGGC
GGATGCGCCT TCCCGGGGTG CCAGATGCCC GCACCATGGT GCGAGGCCCA CCACGTCCAG
GAGTGGTGGA ACGACGGCGT CAGCTCGATC GACAACGGGG TGCTGCTCTG CGGCTACCAC
CACCACCTCG TCCACGACGG ACACTGGCGC ATCGAGATGG TCGCCGGGAT GCCGCGCTTC
CGGCCGCCCT GGAACGACCC CTCCCACCCA CGATCGGCAC CGCGGCGCAA CACCTACCAC
CGGCCCCCGG TGCCTCCCCG GCGTACCTAG
 
Protein sequence
MVGQTIAPVC PLVGELVGDG AGDVDAVAHI LRGLAQARRI VRASTSSASG TVSDGDSEAG 
DDGDGASGTE AVDGSAQLAA MERVLVDAAR EVDADDVRRL TDRCLHLLDQ DGPAPSEGEL
ERLQGVFFSG RRDGLHQIRI ITDDAGREVL ETIFATGTNP RVVTTTCDPD APLPGNDGAC
DVAAADGVDA AAADTAGAVP PAAAGPGPGP GTDAATLAGD VSDVASDASA ASPVASDAGV
ASGASSDSSA ASDAASDADL AGGAAAEVPV ARDGRSLARR RLDALLAACG AALRSAELPA
TGGLPTQVMV TMSLEELRAG LGSAHLPYTG PVPVRAVRRL ACDAGVIPVV LGTSGRVLDV
GRANRLFRDS IRRALVARDG GCAFPGCQMP APWCEAHHVQ EWWNDGVSSI DNGVLLCGYH
HHLVHDGHWR IEMVAGMPRF RPPWNDPSHP RSAPRRNTYH RPPVPPRRT