Gene Bcav_3327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3327 
Symbol 
ID7860293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3689903 
End bp3690460 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content78% 
IMG OID643867427 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002883332 
Protein GI229821806 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.11213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.13372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGGC AGCCGCGCGC CGACGCGCGA CGCAACCGTG AGCGCGTGCT CGCGGCGGCG 
CGGGAGGCGT TCGCGGCCGA CGGCGCGGCG GTGCCGCTCG ACGAGATCGC GCGGCGGGCG
GGCGTCGGGG CGGGCACCGT GTACCGCCAC TTCCCCTCCA AGGAGGCGTT GTTCGCGGCG
GTGATCGACG ACGACGTCGC CCGCCTTCTC GCCGACGCGC GCGAGCTCGC GACGTCCGAC
GATCCCGGCG ACGCGTTCCT CGGCTACCTG CGCCGCCTCG GGGAGGAGGC GGGCGCGCGG
CGAGACCTTG CCGACGCGCT CGCGGTGGCG GGGTTCGACG CCGGCCCCTC GTTCGACACG
TCCGCCCCCA GCCTGCAGGA GGCGCTCGGC GTCCTCCTCG CCCGGGCGCA GGCGGCGGGC
GCCGTGCGCG CCGACGTCGG CACGAGGGAT CTCGTCGCGC TGCTCAAGGG TGCTCTGGTG
GCGGTCGGGG TGGCGGACGA CGACGGCGTG CGGGAGCGCG TGTTCGCCGT GCTGACGGAC
GGGCTCCGAC GCGGCTGA
 
Protein sequence
MTRQPRADAR RNRERVLAAA REAFAADGAA VPLDEIARRA GVGAGTVYRH FPSKEALFAA 
VIDDDVARLL ADARELATSD DPGDAFLGYL RRLGEEAGAR RDLADALAVA GFDAGPSFDT
SAPSLQEALG VLLARAQAAG AVRADVGTRD LVALLKGALV AVGVADDDGV RERVFAVLTD
GLRRG