Gene Bcav_3317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3317 
Symbol 
ID7860283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3676184 
End bp3677479 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content76% 
IMG OID643867417 
ProductMannitol dehydrogenase domain protein 
Protein accessionYP_002883322 
Protein GI229821796 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0246] Mannitol-1-phosphate/altronate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0693665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCACC TCGGGCTCGG CGCGTTCCAC CGCGCGCACC AGGCCTGGTA CACCCACCGT 
GCCAACCTCG CGGCGTCCGG TGCCGGCGGA CACCCGGCGG ACCCGTCGGA TGCCGCTGGC
GCCGCGGACG CCGCGGACCT GTGGGGCATC GCGGCGTTCA CCGGCCGGCG CCCCGACGCC
GCCCGCGCCC TCGCGGCCCA GGGCTGCGCG TACACCCTCC TCGTGCGCGA GCCGGACGGC
GACGCCGCCG AGCGCATCAC GTCGATCTCA GGGGCTTACG ACGGCGCCGA CACCGCGGCC
TGGCGCGGCG CCGTGGCGAA CCCGCGGGTC GCCGTCGTCA CGCTCACGAT CACCGAGCCG
GCGTACGGGG CGACGTCGGC GATGCGTCGC CTCGCCGACG GGCTCGCCGC CCGCCGCGAC
GCCGGGGCGG GCCCGCTCGC CGTCGTCAGC TGCGACAACC TCCCCGCCAA CGGGGCGCGC
ACGCGCGACG CCGTGCTGGG CGCCGCCGAC GACCCGCGCC TCGCCCAGTG GATCACCGAC
CACGTCTCGT TCGTCGACAC GGTGGTGGAC CGGATCACGC CGGCCGCGAC CGACGACGAC
CGTGCGGCCA GCGGCGACCC GTGCGTCGTC GTGACCGAGC CGTTCACCGA GTGGTACCTC
GCCGGCGAGT TCCCGGCCGG CCGTCCCGCG TGGGAGGTCG AGGGCGCCCG GTTCGTGCCG
GACGTCGAGG TCTACACGCG CCGCAAGCTG TGGCTGCTCA ACGCGGGGCA CTCGCTGCTC
GCGTACCTCG GGCTCGCCCG CGGGCACACC AGCATCGACG AGGCGATGGC CGACGGCGAG
TGCCGGCGTG CGCTCGACGC GCTCTGGGAC GACGCCGCAC CGGTCCTTCC GCTGCCCGAG
CGTGAGATCC GCGACGCGCG GGCGGCGCTG GTGCGCCGGT TCACCAACCC GCGGATCAGG
CACCTGCTCG AGCAGATCGC GAAGGACGGC TCGGCGAAGC TGCCTGCGCG GTCGACGCCG
GTCGTGGCCG CCCGGCTCGC CGACGGTGCG ACGCCCGGCG ACGGACAGCT CCGGCTGTGG
TCGGCCTGGC TCGCCCACCT CCGCTCGGGC TGGACGAGCG ACGCCGACCC CGGCGGCGCA
CCCCTCGCCG CGCGCGCCCG CACCTCCCTC GCCGACGGTG CAGCCGCCGT CGTCGACCAC
CTGCTCCCGG CCGCACGGCC CGAGACCATC ACCAGCATCG TCGACGACGT CGCGCGCGGC
GCGGCGCAGA TCGAAGGAAC GAGGAGTACC GCATGA
 
Protein sequence
MVHLGLGAFH RAHQAWYTHR ANLAASGAGG HPADPSDAAG AADAADLWGI AAFTGRRPDA 
ARALAAQGCA YTLLVREPDG DAAERITSIS GAYDGADTAA WRGAVANPRV AVVTLTITEP
AYGATSAMRR LADGLAARRD AGAGPLAVVS CDNLPANGAR TRDAVLGAAD DPRLAQWITD
HVSFVDTVVD RITPAATDDD RAASGDPCVV VTEPFTEWYL AGEFPAGRPA WEVEGARFVP
DVEVYTRRKL WLLNAGHSLL AYLGLARGHT SIDEAMADGE CRRALDALWD DAAPVLPLPE
REIRDARAAL VRRFTNPRIR HLLEQIAKDG SAKLPARSTP VVAARLADGA TPGDGQLRLW
SAWLAHLRSG WTSDADPGGA PLAARARTSL ADGAAAVVDH LLPAARPETI TSIVDDVARG
AAQIEGTRST A