Gene Bcav_3315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3315 
Symbol 
ID7860281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3673962 
End bp3675200 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content75% 
IMG OID643867415 
Productoxidoreductase domain protein 
Protein accessionYP_002883320 
Protein GI229821794 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0394409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC CATCCACGTC CGCCGGTCCC ACGAGGGACG ACGGCGCGGC GTCGCCCGCG 
CCGCTGAAGC TCGCCATCGT CGGGTGCGGC GTCATCGGCC GCCTGCACGC CGAGGTCGCG
GCGGCCAGCC CCGACCTGGA GGTCGTCGCC GTCGTCGACC CGCACCCGGA GCGGGCCGGC
GAGGTCGCCG CCGTGCTGAC CGCCGCAGGC GAGAGGGAAC CGCGCAGCCA CGGCGACCTC
GGCGAGGCCC TGGCCGCGGG CGACGTCGAC GTCGTCGCGG TCTGCGTCCC GAGCGGCGAG
CACGCCGAGA TCGCGATCCA GGCGCTCGAG GCCGGCGCGC ACGTCGTCGT CGAGAAGCCG
CTCGACGTCG CGCTCCCCCC GGCCCGCCGC CTGCGCGAGG CATCGGCCCA GCGGCCGGGG
CAGGTGGTCG CCGTGATCAG CCAGCACCGC CACGACTACT CCTCGCTCGC CGTCCACCGC
GCGCTGGAGG CCGGCCGGTT CGGCCGCGTG ACCTCCGCCG TCGCCAACAT CGACTGGTAC
CGCACCCAGG AGTACTACGA CTCCGGCGAC TGGCGCGGCA CCTGGGCGCT CGACGGCGGC
GGCGCGCTCA TGAACCAGGG CGTGCACACG CTCGACCTGC TGCTGTGGTT CCTCGGCGAG
CCGATCGACG TCGTCGCGCA CACGGCACGC CTCGGCCACG AGCGGATCGA GGTGGAGGAC
GTCGCCGTCG CGATCATCCG GTTCACGTCC GGCGCGCTGG CCACGCTGCA CGCCTCGACC
ACCGTGTACC CGGACCTCGG CGTGCGGCTC CACGTCCACG GCACGGCCGG GTCCGCCGTC
ATCGAGGGCG ACGACCTCGC GTTCTTCCAC GCGCTCGACG CCGAGGACGG CGAGTGGAAG
GCGAACCAGG CGCACCTCGA GGTGTCCGAG GCGGGCACGG TCGCGAGCCC GCGCGGCAGC
CTCGACCCGT CCGGCTCGCA CGCCAGCCAG TACGGCAACT CCCATGCGAC GCAGTGGGCC
GACGTCGTCG CGGCGATCCG CGAGCACCGC GCCCCCTGGG TGACGCTCGA CGACGGCCTG
CGCGCCCTCG CCACCGTCCG CGCCGTGTAC CTGTCGGCCA CGCTCGGCAA GCCGGTGCGC
GTGACGGACG TGCTCGACGG CGTCTACGAC GACGTCGCCA CCCGCACCGG GTCGTCCGAC
CCGGTCCCCG CCGATCAGCG CACGGAGGTG CTGCGATGA
 
Protein sequence
MSTPSTSAGP TRDDGAASPA PLKLAIVGCG VIGRLHAEVA AASPDLEVVA VVDPHPERAG 
EVAAVLTAAG EREPRSHGDL GEALAAGDVD VVAVCVPSGE HAEIAIQALE AGAHVVVEKP
LDVALPPARR LREASAQRPG QVVAVISQHR HDYSSLAVHR ALEAGRFGRV TSAVANIDWY
RTQEYYDSGD WRGTWALDGG GALMNQGVHT LDLLLWFLGE PIDVVAHTAR LGHERIEVED
VAVAIIRFTS GALATLHAST TVYPDLGVRL HVHGTAGSAV IEGDDLAFFH ALDAEDGEWK
ANQAHLEVSE AGTVASPRGS LDPSGSHASQ YGNSHATQWA DVVAAIREHR APWVTLDDGL
RALATVRAVY LSATLGKPVR VTDVLDGVYD DVATRTGSSD PVPADQRTEV LR