Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3312 |
Symbol | |
ID | 7861784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 3670489 |
End bp | 3671895 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643867412 |
Product | Glucuronate isomerase |
Protein accession | YP_002883317 |
Protein GI | 229821791 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1904] Glucuronate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0386797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCCCTGC ACCCCGATCG CCTGTTCCCG GCCGACCCCG CGACGCGCGG AGTGGCGCGC ACCCTGTACG CGGCCGCGGC GTCGGCGCCG ATCGTGTCCC CGCACGGACA CGTCGACGCC GGGCTGCTCC TGCGCGACGA GCCGTTCACG GACCCGGCCG ACCTGCTCGT CGTGCCCGAC CACTACGTGC TGCGCCTGCT GCACGCGCAC GGCGCCGACC TCGGAGCGCT CGGGCGCGCC CCGCGGGGCG ATTCCCCCGG CGCCGACCCG CGCGAGATCT GGCGGACGTT CTGCGCGCAC TGGGGGGCGT TCGCCGGCAC GCCGGTGCGG TACTGGACCA CGGCGATCCT CGCCGACGTC TTCGGCACGG ACCTGACGCC GTCGTCGGCC ACCGCCGACG CCCTCTACGA CGAGCTCGTC GCCGCTCTCG CGCGCCCGGA GTTCCGCCCC CGCGCCCTGT TCGAGCGGTT CGGCATCGAG GTGCTCGCGA CGACCGACGA CCCCGCCGAC GACCTCGCCG ATCACGCCGC GCTGCGGGAC GACCCGGAGT TCGCCGGGCG CGTGCTGCCG ACGTTCCGCC CCGACGCCTA CCTCGACCCG GGGGTGCCCG GCTGGCCGGC GCGGCTCGAC CGGCTGGGCG CGGCCGCCGG CATCGACACC GGGACGCACG CGGGTCTCGT CGCGGCGCTG GAGAACCGGC GCGCGTACTT CGCCGAGAGG GGGGCGACGG CGACCGACAC CGGTCCCGTC GACGCGTGGG CGCTGCCGCT CAGGGCGCCC GAGGCCGAGC GCATCCATGC CGCGTTCCTG GCCTCCTCGG GCACTCCCGA GGAGGCGACG GCGTACCGCC GCCACATGCT GTTCGAGCTC ATGCGGATGG CGAGCGAGGA CGGCCTCGTC ATGCAGCTGC ACCCGAGCGT GATCCGCAAC CACCACGGCC CGACGCTCGA GCGGTACGGG CCGGACACCG GTCACGACCT GCCAGACGTC GGGGCGTTCA CGCGGCCGCT GCGGACGGCG CTCGAGGCGT TCGGCACGAA CCAGCGGTTC CGGCTCGTGC TCTTCACCGT GGACGAGACG ACGTTCTCCC GGGAGATCGC GCCGCTCGCC GGCTTCTATC CGAGCGTGTA CGCCGGGGCG CCGTGGTGGT TCCTCGACAC CCCGTCGGCG ATCGCCCGCT ACCGCGGCGC GGTCACGGAC TCCGCCGGCT TCGGCAAGAC GTCCGGCTTC ATCGACGACA CCCGAGCGTT CTGCTCGATC CCCGCGCGGC ACGACATGGC CCGCCGGATG GACGCCGGCT TCCTCGCCTC GCTCGTGGTC ACGCACCAGC TGAGCGAGGA GGAGGCGGCA GCGATCGCCG TCGACCTCGC TGCGCCGCTC CCGCGCCGGG TCTTCCGCCT CGAGTAG
|
Protein sequence | MALHPDRLFP ADPATRGVAR TLYAAAASAP IVSPHGHVDA GLLLRDEPFT DPADLLVVPD HYVLRLLHAH GADLGALGRA PRGDSPGADP REIWRTFCAH WGAFAGTPVR YWTTAILADV FGTDLTPSSA TADALYDELV AALARPEFRP RALFERFGIE VLATTDDPAD DLADHAALRD DPEFAGRVLP TFRPDAYLDP GVPGWPARLD RLGAAAGIDT GTHAGLVAAL ENRRAYFAER GATATDTGPV DAWALPLRAP EAERIHAAFL ASSGTPEEAT AYRRHMLFEL MRMASEDGLV MQLHPSVIRN HHGPTLERYG PDTGHDLPDV GAFTRPLRTA LEAFGTNQRF RLVLFTVDET TFSREIAPLA GFYPSVYAGA PWWFLDTPSA IARYRGAVTD SAGFGKTSGF IDDTRAFCSI PARHDMARRM DAGFLASLVV THQLSEEEAA AIAVDLAAPL PRRVFRLE
|
| |