Gene Bcav_3312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3312 
Symbol 
ID7861784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3670489 
End bp3671895 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content75% 
IMG OID643867412 
ProductGlucuronate isomerase 
Protein accessionYP_002883317 
Protein GI229821791 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1904] Glucuronate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0386797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCTGC ACCCCGATCG CCTGTTCCCG GCCGACCCCG CGACGCGCGG AGTGGCGCGC 
ACCCTGTACG CGGCCGCGGC GTCGGCGCCG ATCGTGTCCC CGCACGGACA CGTCGACGCC
GGGCTGCTCC TGCGCGACGA GCCGTTCACG GACCCGGCCG ACCTGCTCGT CGTGCCCGAC
CACTACGTGC TGCGCCTGCT GCACGCGCAC GGCGCCGACC TCGGAGCGCT CGGGCGCGCC
CCGCGGGGCG ATTCCCCCGG CGCCGACCCG CGCGAGATCT GGCGGACGTT CTGCGCGCAC
TGGGGGGCGT TCGCCGGCAC GCCGGTGCGG TACTGGACCA CGGCGATCCT CGCCGACGTC
TTCGGCACGG ACCTGACGCC GTCGTCGGCC ACCGCCGACG CCCTCTACGA CGAGCTCGTC
GCCGCTCTCG CGCGCCCGGA GTTCCGCCCC CGCGCCCTGT TCGAGCGGTT CGGCATCGAG
GTGCTCGCGA CGACCGACGA CCCCGCCGAC GACCTCGCCG ATCACGCCGC GCTGCGGGAC
GACCCGGAGT TCGCCGGGCG CGTGCTGCCG ACGTTCCGCC CCGACGCCTA CCTCGACCCG
GGGGTGCCCG GCTGGCCGGC GCGGCTCGAC CGGCTGGGCG CGGCCGCCGG CATCGACACC
GGGACGCACG CGGGTCTCGT CGCGGCGCTG GAGAACCGGC GCGCGTACTT CGCCGAGAGG
GGGGCGACGG CGACCGACAC CGGTCCCGTC GACGCGTGGG CGCTGCCGCT CAGGGCGCCC
GAGGCCGAGC GCATCCATGC CGCGTTCCTG GCCTCCTCGG GCACTCCCGA GGAGGCGACG
GCGTACCGCC GCCACATGCT GTTCGAGCTC ATGCGGATGG CGAGCGAGGA CGGCCTCGTC
ATGCAGCTGC ACCCGAGCGT GATCCGCAAC CACCACGGCC CGACGCTCGA GCGGTACGGG
CCGGACACCG GTCACGACCT GCCAGACGTC GGGGCGTTCA CGCGGCCGCT GCGGACGGCG
CTCGAGGCGT TCGGCACGAA CCAGCGGTTC CGGCTCGTGC TCTTCACCGT GGACGAGACG
ACGTTCTCCC GGGAGATCGC GCCGCTCGCC GGCTTCTATC CGAGCGTGTA CGCCGGGGCG
CCGTGGTGGT TCCTCGACAC CCCGTCGGCG ATCGCCCGCT ACCGCGGCGC GGTCACGGAC
TCCGCCGGCT TCGGCAAGAC GTCCGGCTTC ATCGACGACA CCCGAGCGTT CTGCTCGATC
CCCGCGCGGC ACGACATGGC CCGCCGGATG GACGCCGGCT TCCTCGCCTC GCTCGTGGTC
ACGCACCAGC TGAGCGAGGA GGAGGCGGCA GCGATCGCCG TCGACCTCGC TGCGCCGCTC
CCGCGCCGGG TCTTCCGCCT CGAGTAG
 
Protein sequence
MALHPDRLFP ADPATRGVAR TLYAAAASAP IVSPHGHVDA GLLLRDEPFT DPADLLVVPD 
HYVLRLLHAH GADLGALGRA PRGDSPGADP REIWRTFCAH WGAFAGTPVR YWTTAILADV
FGTDLTPSSA TADALYDELV AALARPEFRP RALFERFGIE VLATTDDPAD DLADHAALRD
DPEFAGRVLP TFRPDAYLDP GVPGWPARLD RLGAAAGIDT GTHAGLVAAL ENRRAYFAER
GATATDTGPV DAWALPLRAP EAERIHAAFL ASSGTPEEAT AYRRHMLFEL MRMASEDGLV
MQLHPSVIRN HHGPTLERYG PDTGHDLPDV GAFTRPLRTA LEAFGTNQRF RLVLFTVDET
TFSREIAPLA GFYPSVYAGA PWWFLDTPSA IARYRGAVTD SAGFGKTSGF IDDTRAFCSI
PARHDMARRM DAGFLASLVV THQLSEEEAA AIAVDLAAPL PRRVFRLE