Gene Bcav_3311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3311 
Symbol 
ID7861783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3669922 
End bp3670416 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content74% 
IMG OID643867411 
Productmembrane-flanked domain protein 
Protein accessionYP_002883316 
Protein GI229821790 
COG category[S] Function unknown 
COG ID[COG3402] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0274064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCAG GCGTGACGCT CCGACCTCCC CGCAACCGCT ACGACCCACG CACCGTCGGC 
TGGTGGCGCA CGCAGCTCGC GATCGCGACC GCCGTCGTCG TCGTGCCGCT CGTCGTGCTC
GGCGTGCTCA TCGCACCGGC GCGCACGTGG CTGCTGCTCC CGGCGGCCGT CGTGGGGGTC
ATCGGGCTGG CGGCGACGGT CGCGCTGCCG ATCTGGTGGC ACCGCGTGCA CCGCTGGGAG
ATCACCGACC ACGCCGTGTA CGCCCTGACC GGGTACTTCT GGCGGACGTG GCGCGTGGCG
CCGATGTCGC GCATCCAGAC GGTCGACACG ACGCGCGGCC CGGTCCAGGG CGCGTTCGGG
CTCGCGACGC TCGTCGTCAC GACGGCGTCC TCCGCGGGCG CCGTGAAGCT CGAGGGGCTC
GACGCCGAGA CCGCGGCGGA GCTCGCCGCG GAGCTGACCC GACTGACCGA CGCCACGCCG
GGCGACGCGA CATGA
 
Protein sequence
MTSGVTLRPP RNRYDPRTVG WWRTQLAIAT AVVVVPLVVL GVLIAPARTW LLLPAAVVGV 
IGLAATVALP IWWHRVHRWE ITDHAVYALT GYFWRTWRVA PMSRIQTVDT TRGPVQGAFG
LATLVVTTAS SAGAVKLEGL DAETAAELAA ELTRLTDATP GDAT