| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3309 |
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| Symbol | |
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| ID | 7861781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 3667572 |
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| End bp | 3668363 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 643867409 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002883314 |
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| Protein GI | 229821788 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0128625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCC CCACCCCCGT CGCCGGCCGC TTCGACGGCG CCGTCGCCCT CGTCGTCGGC
GCCGCTCACG GCATCGGTCG GGCGTGCGCC CACCGCCTCG CCGCCGAGGG CGCACGGGTC
GCCGTCGCGG ACCTGGACCA CGACGTCGCC GTCACCGTCA CCGACGCCCT GCCCGGCGCG
GGGCACCTCG CCGTGACGCT CGACGTCACG GACCGCGCCT CCGTCGATGC GGCGGTGGCC
GACGTCGTCG CCCGCGCCGG CACGCTCGAT CTGCTCGTCC ACGTCGCGGG CGCGGACTCC
GCGCACCCCG CGTTCGAGGA GACCGACGAC GACGTCTGGC GCGCCATGCT CGACCTCAAC
CTCGTGGGCA CCGCACGCAC GTGCCGGGCC GCGGTCCCGC ACCTGCGGCG CAGCACGTGG
GGTCCGGCGA TCGTCACGAC GAGCAGCGTC AACGCCCTGC TGGCGCTCGG CAGCGAGCCG
TACTCGGCGG CGAAGGCCGG CTTGTCGTCG CTCACCCAGA ACCTCGCGGC GACGCTCGGC
CCGGAGGGCA TCCGGATCAA CACCGTGGCC CCCGGCACGA TCCGCACCCG GAACTGGGAC
AACCAGCCCG GCGGCGCGGA CAGACTGCGC GGCCTGTACC CGCTCGGGCG GGTCGGCGAA
CCGGAGGACG TGGCCGCCGC CGTCGCGTTC CTCGCCTCGC ACGACGCGGC CTGGATCACC
GGCGTCACGC TGCCGATCGA CGGCGGGCTG CTCACCGGGC CCGGGCTCAT CCCCGGCGAC
GAGCGCACCT GA
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| Protein sequence | MTSPTPVAGR FDGAVALVVG AAHGIGRACA HRLAAEGARV AVADLDHDVA VTVTDALPGA
GHLAVTLDVT DRASVDAAVA DVVARAGTLD LLVHVAGADS AHPAFEETDD DVWRAMLDLN
LVGTARTCRA AVPHLRRSTW GPAIVTTSSV NALLALGSEP YSAAKAGLSS LTQNLAATLG
PEGIRINTVA PGTIRTRNWD NQPGGADRLR GLYPLGRVGE PEDVAAAVAF LASHDAAWIT
GVTLPIDGGL LTGPGLIPGD ERT
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