| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3292 |
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| Symbol | |
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| ID | 7861764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 3648297 |
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| End bp | 3649763 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643867392 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_002883297 |
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| Protein GI | 229821771 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.223704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00299224 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCTCGA TCGACGCCCC GCTCACTCGC CGCGTGATGC TCGGCGGCAC GGCCGCAGCC
GCCGGCGCTC TCGCCCTCGG TCCGGCCGCC GCACACGCCG GAGGGGGCCG CCCCGGCCAT
CCGCCCACCT ATGTGGACGC GACCGTCCAC GACCCCGACG TCGTCCGAAC CGGCGGCCGC
TACTACGTCT TCGGTTCCCA CGCCGCCGCC GCTTCCACGG AAGATCTGTT CGCCTGGGAC
CAGATCGCCT ACGACGGCGT GACGCCGGAG AACCCGCTGT TCGACGACGT CACCGTCGAG
CTCGCCGAGG TGCTCGAGTG GGCCCGGACG ACGACGCTCT GGGCGCCGGA CGTCAGCCGG
CTCCCGGACG GCCGCTTCTA CTACTACTAC TGCGCGTGCG AGGGGACGTC GCCGCGGTCA
GGGCTCGGCG TCGCCGTCGC CGACGAGGTC ACCGGCCCGT ACCGCGACCT CGGCATCATC
CTGCGCTCCG GGCAGGACGA CGGCACGAGC GAGGAGCCGG GCGAGGCGTA CGACCCGTGG
GTCCACCCCA ACGTCATCGA CGCCGATGTG TTCGCCGACG ACGACGGCAC CTGGTGGATG
GTCTACGGCT CGTTCTCCGG TGGCATCCTC CTGCTCGAGC TCGACCCGGC GACGGCGAAG
CCCGTCCCGG GGCAGGGGTA CGGGCGGCAC CTCATGGGCG GCAACCACGC CCGCATCGAG
GGCCCGGCGA TCATGTACCA CCCCGGCACC CGCTACTACT ACCTGTTCGT GACGTTCGGC
GGCCTCGACG CCGCGGGCGG CTACAACATC CGCGTGTCCC GCGCGCGGAC GCCGGAGGGT
CCGTGGTTCG ACATCTCCGG CACGGACATG TCGACGGTCA AGGCGGATCC CGACCTGCCG
CTGTTCGACG ACGTCACGAT CGCGCCCCAC GGCACGAAGA TCGCCGGCAA CGTCCGCTTC
CGGACGCCGG ACGGCGCACC CGGAACGGGA TACGTCTCGC CCGGCGGCTG CTCGCCCTGG
TACGACGAGG AGTCGGGCGA CGCGTTCCTC GCGTTCCACA CCCGCTTCCC CGGCACGGGC
GAGATCCACA ACGTGCGCGT CCACCGGCTC GCCATGACCC GGTCCGGCTG GCCCGTCGTC
CTCCCGTTCC GGTACGCCGG GGAGCGCCTC GGTGGCCTCG GTCGCCACGA CGTCGCCGGC
GACTACGAGG TGGTGACGAT GGCGAAGCCC ATCGGCCCCG AGATCGCCGA GTCCCGCCCG
GTGACGCTGA CGCGGAACGG ACGCGTCACC GGGGAGCACA CCGGCCGCTG GCGGCTCACC
GGCCGCTCGC ACGTGGTCCT CGAGCTCGAC GACGTCACGT ACTCCGGTGT CGCCGCGACG
CAGTGGGACC CCGATCTCGA GGCGTGGTCG GTGACGTTCT CCGCGGTGTC CGACGCCGGC
ACGTCCGTGT GGGGCGCGCG CCGCTGA
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| Protein sequence | MPSIDAPLTR RVMLGGTAAA AGALALGPAA AHAGGGRPGH PPTYVDATVH DPDVVRTGGR
YYVFGSHAAA ASTEDLFAWD QIAYDGVTPE NPLFDDVTVE LAEVLEWART TTLWAPDVSR
LPDGRFYYYY CACEGTSPRS GLGVAVADEV TGPYRDLGII LRSGQDDGTS EEPGEAYDPW
VHPNVIDADV FADDDGTWWM VYGSFSGGIL LLELDPATAK PVPGQGYGRH LMGGNHARIE
GPAIMYHPGT RYYYLFVTFG GLDAAGGYNI RVSRARTPEG PWFDISGTDM STVKADPDLP
LFDDVTIAPH GTKIAGNVRF RTPDGAPGTG YVSPGGCSPW YDEESGDAFL AFHTRFPGTG
EIHNVRVHRL AMTRSGWPVV LPFRYAGERL GGLGRHDVAG DYEVVTMAKP IGPEIAESRP
VTLTRNGRVT GEHTGRWRLT GRSHVVLELD DVTYSGVAAT QWDPDLEAWS VTFSAVSDAG
TSVWGARR
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