Gene Bcav_3280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3280 
Symbol 
ID7861752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp3636424 
End bp3637503 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content73% 
IMG OID643867380 
ProductDNA integrity scanning protein DisA 
Protein accessionYP_002883285 
Protein GI229821759 
COG category[R] General function prediction only 
COG ID[COG1623] Predicted nucleic-acid-binding protein (contains the HHH domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.360002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00479784 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGAGC TCGTCGCCGA TCCCACCGGC CGCGCCGTCC TGCGCGCTGT CGCGCCCGGC 
ACGGAGCTGC GCGACGGCCT CGAGCGCATC CTGCGCGGCC GCACCGGCGC GCTCATCGTG
CTCGGGTACG ACGAGGTCGT CGAGGAGATG TGCTCCGGCG GCTTCGTGCT CGACGTCGCG
TTCTCGGCCA CGCGGTTGCG AGAGCTGGCG AAGATGGACG GGGCGATCGT GCTGGACCGC
GGCGCGACGC GGGTGCTGCG CGCCGCCGTC CAGCTGCTGC CCGACGCAGC GATCGAGACC
GGCGAGTCCG GCACCCGGCA CCGCACCGCG GAGCGCGCCG CGAAGCAGAC CGGCTTCCCC
GTGATCTCCG TCAGCCAGTC GATGCGGATC GTCGCCATCT ACTCCGACGG CCGGCGCTGG
GTCCTCGAGG ACTCCGACGC GATCCTGTCC CGCGCCAACC AGGCGCTCGC GACGCTCGAG
CGGTACAAAT CCCGGCTCGA CGAGGTGTCG GGCACGCTCT CGGCCCTCGA GATCGAGGAC
CTCGTCACGG TGCGTGACGT GGCGTCGGTC GTGCAGCGCC TCGAGATGGT CCGCCGGATC
TCCGTGGAGA TCGCCGGGTA CGTCGACGAG CTGGGCACCG ACGGTCGCCT GCTCTCCCTG
CAGCTCGACG AGCTCATCGG CAACGTCGGC CCGGAACGCG AGCTCGTCGT CAGCGACTAC
GTCGACGCCC GCCGGGCCGC CGCCCTCGAC GACGTCCTCG CCGGCCTCGC CCGGCTCGAC
TCCACCGACC TCATCGACCT CGTCAAGATC GCGCAGGTGC GCGGCCTCGG CGGGCCGGGC
GGCGATGCGC TCGACTCCGC CGTCGGGCCG CGCGGCCACC GGATGCTCTC GAAGATCCCC
CGGCTCCCCT CGCCGGTCAT CGGCGCGATG GTGGACCACT TCGGCACCCT GCAGAAGATG
CTCTCGGCGA GCGTCGAGGA TCTCCAGCTG GTCGACGGCG TCGGCGCGCT GCGTGCCCGG
TCCGTCCGGG AGGGTCTGTC GCGGCTCGCC GAGTCGTCCC TGCTCGAGCG GTTCGTCTGA
 
Protein sequence
MSELVADPTG RAVLRAVAPG TELRDGLERI LRGRTGALIV LGYDEVVEEM CSGGFVLDVA 
FSATRLRELA KMDGAIVLDR GATRVLRAAV QLLPDAAIET GESGTRHRTA ERAAKQTGFP
VISVSQSMRI VAIYSDGRRW VLEDSDAILS RANQALATLE RYKSRLDEVS GTLSALEIED
LVTVRDVASV VQRLEMVRRI SVEIAGYVDE LGTDGRLLSL QLDELIGNVG PERELVVSDY
VDARRAAALD DVLAGLARLD STDLIDLVKI AQVRGLGGPG GDALDSAVGP RGHRMLSKIP
RLPSPVIGAM VDHFGTLQKM LSASVEDLQL VDGVGALRAR SVREGLSRLA ESSLLERFV